Xiphophorus maculatus (southern platyfish): 102229832
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Entry
102229832 CDS
T02923
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like isoform X2
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102229832
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102229832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
IQ_SCN5A_C
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
102229832
NCBI-ProteinID:
XP_014328997
Ensembl:
ENSXMAG00000016263
LinkDB
All DBs
Position
2:complement(20034346..20056909)
Genome browser
AA seq
1653 aa
AA seq
DB search
MSWFEFWSSRLQRAEHLMKTQQLTPSQRNQLHGNHEVRMELQNQRMTSLLPPVGVEVFRR
FTPASLEEIQQEAEKNKKKPEKDQSKPASHLQAGKPLPFIYRAPSPELLSTPLEDLDPFY
QSQKTFIVICKKKLIHRFDADPACYLLSPFNCLRSSAIRILLHPIFSVLFILTILTNCIL
MTMPHMLWTRDVEYVFMIIYIGEVILKLLSRGVCFGRFTFLRDPWNWLDVLNIISSVIAM
SVGLREFAALKTISRVLKLFSYMPGPKKTAERLVQSLKWLAIAMVLMVFVLSILALIGTQ
FFMGVLKHKCVISSPSGRMDTPTTEQPEYFVTHNETIHFYDNFVFEDYINKVENLYFMPG
QSDPMLCGNSSDSRRCPRGFTCMKTGRNPEYGFTSFDTFSWSLLAVVRIAMQDLSDVLLQ
LTLQAAGKAYMSVFVLVFFPGCFLVVSLFVAVVAIALVKQEKAEAAEAKKTEEEFSWIVK
VLKKREDSEVTGETELLEEHDSAQKKKPAARTLHQENVTVEDTKDEVQPSCCSCTDRILQ
GECCICSQWLKLKLRPFVLSQFFDLGIIICIIINTIFMAMDHHEMRPKFGKKLANSNVVF
TAIFTAELLLKVLALGIKGYFKVSWHIFDFIVIILSLLDLCLANVKGLSLLRSVRLLRPL
RLGRWWSDLGILMKMTWFSVGNLSVVLVFVVFMFAVVGTQLFQQNYQDHEENVCMFSSRC
KLPRWHMMDFSHSFLLVFRVLSGEWIECMWDCMKISNKGLCVIYYMAVVLIGNILVLNLF
LHLFLSPFCTNKPGSAAGQGPNKRHAGSWILESFRALTGKRTHANTDQKVESKNKDRQDY
LALTPVSSGQPSLRHHSNDSVKDSSVVELSRSPGNIFKIQADTNNEEKKQNHGDVQELQD
NKSQTENSPGDCCCAICYNCCPIQDIDTSKGAGRGWYKFRKACLLIVQHRLFEIFIIFIV
LLSSAALALEDTMLFHRPVLQMVLDKADQVFTFLFLMEMLLKWTAFGFKKYFSSFWCWLD
FLILDVSLFSSVCVMLGHSAAYLRTLRALRTLRVPSRFKGTRAVLRVMAATAPSMCNSLL
VVLFVWLIFSILGVNLFAGRFAYCSNHTDGIIFEVNNKMQCYELVGSSPTEVYWKYTEFN
FDHVGMGLLSLLIMATSADWKEIIYSAVDSTEVDIQPVHESRPVMYLYFVLFIIFGCFFS
ANLFIRFFVDALHQLSNKAGGKHVFMTEEQLKFHGTVRKMFSKSPEKSAPRPTNRFQARL
FDLVTAPLFEILVVVLICVNVVVMMMESDDLSEQGQEVLMWFLYIFLILYCIEFFLKITA
LRRHYFSFGLNILDFVVLIFMILGLFISDLLAHYFVSPAALFLLRLARISRVLPFFRLGR
RIQMLLTGFMMSLPALMNIGLLFLLVVYTYSFVGTRIFYMINFGTIGDSMISMILFSLSP
TWSLLVRNSTKYSPPTVIPLGYWANLSAGVVFFCSYVLLHLLLVVHLFIAVILESFNSRE
AEDAVLLQMFYNTWRKFDPEASQVIQYSELSDFCDALQDPLRIPKPNNIRLINMDLPLLP
GDQICCLDVLKALMTQTFGEEREMESLKDQLEKKFTGNNRTQVSHEPISSTLKRKQEEVA
AAVIQRAFRKHQAQNGAPDQPEDKTTGVSASSQ
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtttgagttttggagcagcaggctgcaacgagctgagcatctgatgaaaaca
cagcagctgaccccctcccagagaaaccagttacatggcaaccacgaagttcggatggag
ctacaaaaccagaggatgacatctctgctgccccctgttggtgtggaggtcttcaggcgc
tttacgccagcctcgttggaagagatccaacaagaagctgagaagaacaaaaagaaacca
gagaaagaccagagcaaaccagccagtcacctgcaggcggggaaacctctcccttttatt
taccgggccccgtccccagagcttctcagcacacctctggaagatctggatccgttctac
caatcacagaagaccttcatcgtcatctgtaaaaagaagctcatccacaggtttgatgct
gatccagcctgttacctgctcagcccattcaactgtttgagatcctccgccatcaggatc
ctccttcaccctatattcagcgtcctcttcatcctgacgattctgaccaattgtatttta
atgacaatgcctcacatgttgtggaccagagacgtggagtatgtgttcatgattatctac
attggtgaggtcatcctgaagcttttgtcacgaggagtctgctttggacggttcaccttc
ctcagagatccctggaactggctggatgtcctcaacatcatatcatctgttatcgcgatg
tctgttggtttgagggagtttgctgctttgaaaacgatttctcgtgtgttgaagctcttc
agctacatgccaggtccgaagaagacagctgaaaggcttgtgcagtcgttgaagtggctg
gctattgccatggtcctgatggtgttcgtcctgagtatcttagctctgattggcacgcag
tttttcatgggtgtcctcaagcataaatgtgtcatttcttctccatcgggaaggatggac
acaccgaccactgagcaacctgagtacttcgtcactcacaacgagacaattcatttctat
gacaactttgttttcgaggattatatcaacaaagtagaaaacctttatttcatgcctggt
cagtctgaccctatgctgtgtgggaattcctcagattctagacgctgtccgaggggtttc
acctgcatgaagacagggaggaacccagagtatggatttaccagctttgacacgttcagt
tggtctctgctggctgtggtcaggatcgcaatgcaggacctttcggacgtcctgctgcag
ctgacattgcaagcagcaggtaaagcctatatgagtgtgtttgtgctcgtcttcttccct
ggatgtttcctggtggtcagcctctttgtggcagtggttgccatagcgctggtgaaacag
gaaaaggctgaggctgctgaggccaagaagacagaagaagagtttagctggattgtgaag
gtgctgaagaagagagaggacagtgaggtcactggtgagacggagctcctggaagaacat
gactcagcacagaagaagaaaccagcagcaaggactctacatcaggagaacgtcactgtg
gaagatactaaggatgaggttcagccttcctgttgctcctgcactgacagaatcctgcag
ggcgaatgctgcatctgctctcagtggctcaaactgaagctccgcccttttgtcctgagt
cagttctttgatctgggaattattatttgcatcatcatcaacactatcttcatggccatg
gaccatcatgaaatgaggccgaaatttggaaagaagctggctaattcgaatgtagtcttc
actgcgatcttcacagcagaacttctcctcaaagttctggctctgggcattaaaggctac
ttcaaggtgagctggcacatctttgacttcatcgtcatcatcctcagtctgttggatctt
tgtctggctaacgtcaagggtctgtctctgttgcgctcagtgagattgttgcgaccactg
agattgggtcgttggtggtccgacttgggcatactgatgaagatgacctggttttcagtg
ggaaacctcagtgtggttctggtctttgtggtcttcatgtttgccgtggtcggcacacag
ctctttcagcagaactatcaagatcatgaagaaaatgtctgcatgttctcctcccgctgc
aagcttccacgctggcacatgatggacttttcccactccttcctgctcgtcttcagagtt
ctcagtggcgagtggattgaatgcatgtgggattgcatgaagatctccaacaagggcctt
tgtgtcatctactacatggctgttgtgcttatcggaaacatcctggtgttgaatttgttt
ctccatctgttcttgagcccattctgtactaataaaccaggctctgcagcaggacaagga
ccaaataaacgtcatgctggatcctggatcctggagtctttcagggctctaacaggtaaa
aggacccatgctaacaccgatcagaaagttgagtcaaagaacaaagacagacaggactat
ctggctttaacgcccgtcagctcgggccagccttcacttagacatcacagtaatgactca
gtcaaagactcgagcgtggtggaactcagcagatctcctgggaacatctttaaaatccaa
gctgacacaaacaatgaagagaagaagcagaatcatggtgatgtgcaggagcttcaggac
aacaaaagtcagacagaaaactcacctggagattgctgctgtgcaatttgttacaactgc
tgtccgatccaggatatagacacatccaaaggagcagggagggggtggtataagttcagg
aaggcatgtctcctcatcgtacaacacagattatttgaaatcttcatcatcttcatcgtc
ctgctgagcagcgccgctttggcgttagaagacacaatgctgttccaccgtccagtcctg
cagatggttctggacaaagcagaccaggtgttcaccttcctgttcctgatggagatgctt
ctcaagtggactgcttttggattcaagaaatacttcagcagcttttggtgctggctcgac
tttctcatcttagacgtgtctctgttcagctcggtttgtgtcatgctgggacactccgct
gcatacctgaggaccctgagggcgctgaggaccttgagggtcccgtctcgcttcaaaggc
acgagggcggtgcttcgggtcatggcggccactgcgccctccatgtgcaactctctgctg
gtcgttctgtttgtctggctgatcttcagcatcctgggagtgaacttgtttgcaggaagg
ttcgcttactgttccaaccacacagacggcataatctttgaagtgaacaacaagatgcag
tgttatgagctcgttggcagcagccccacagaagtctactggaaatacactgagtttaac
tttgaccatgtggggatgggtttactttcgctcctgatcatggccacatcagcagactgg
aaagaaatcatctactccgctgtggactccacagaggtggacattcagcccgtacatgag
tccagaccggtcatgtacctgtactttgtccttttcatcatttttggctgcttcttcagc
gccaacctcttcatcaggttctttgtcgacgctctccatcagctgagcaacaaggctgga
ggtaaacatgttttcatgacggaggagcagctgaagtttcacggcaccgtcaggaagatg
ttctccaagtcacctgagaaatctgctccacgcccaacgaaccggtttcaggctcggctc
ttcgacctggtgaccgctccgctgtttgagatcctggtggtggtgctgatctgtgtgaac
gtggtagtgatgatgatggagtcagacgatctgtctgagcaaggccaagaggttttgatg
tggtttttgtacatcttcttaattctctactgcatcgagttcttcctgaagatcactgct
ctcagacggcactacttcagcttcggcctgaacatcctggactttgtagtcctcatcttt
atgatcttaggcttgttcatcagtgatttgttggcgcactattttgtcagcccggctgcc
ttgtttcttcttcggttggctcgcatcagcagagtcctccccttcttccgtttgggtaga
aggatacagatgctgctcactggcttcatgatgtctcttcctgccctcatgaacatcggg
ctcctcttcctccttgtggtgtacacctattcctttgttgggacgcgtattttttacatg
atcaactttgggacaattggggacagcatgatcagtatgattctcttcagcctgtctcct
acctggtcccttctggtgaggaatagcacgaaatattctccacccacagtcatcccactc
gggtactgggccaacctatcggcaggcgtcgtcttcttctgctcctacgtcctgctgcac
ctcctgctggtggtccacctcttcattgctgtcatcctggagagtttcaacagcagggaa
gcagaagacgccgttcttctgcagatgttttacaacacctggagaaagtttgatcctgaa
gcctcacaggtcatacagtacagtgagctgtcagatttttgcgatgcgctccaggatccg
ctgaggattcctaagccaaacaacatccggctgatcaacatggatctgcctctgctcccg
ggagaccagatctgctgcctggatgtcctgaaagcactcatgactcagacatttggtgaa
gagagagaaatggaatctcttaaagaccagctggagaagaaattcaccggaaacaataga
acacaggtgtctcatgaaccaatcagcagcaccctgaagaggaaacaggaagaggtagca
gcagcagtgatccagagagcgttccggaagcaccaggcgcagaatggagctccagaccag
cctgaggacaaaaccacaggcgtgtcggcgtcttcccaatga
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integrated database retrieval system
