KEGG   Xiphophorus maculatus (southern platyfish): 102231253
Entry
102231253         CDS       T02923                                 
Name
(RefSeq) tumor necrosis factor-like isoform X1
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
xma  Xiphophorus maculatus (southern platyfish)
Pathway
xma04010  MAPK signaling pathway
xma04060  Cytokine-cytokine receptor interaction
xma04150  mTOR signaling pathway
xma04210  Apoptosis
xma04217  Necroptosis
xma04350  TGF-beta signaling pathway
xma04620  Toll-like receptor signaling pathway
xma04621  NOD-like receptor signaling pathway
xma04622  RIG-I-like receptor signaling pathway
xma04625  C-type lectin receptor signaling pathway
xma04920  Adipocytokine signaling pathway
xma05132  Salmonella infection
xma05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102231253
   04350 TGF-beta signaling pathway
    102231253
   04150 mTOR signaling pathway
    102231253
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    102231253
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102231253
   04217 Necroptosis
    102231253
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    102231253
   04621 NOD-like receptor signaling pathway
    102231253
   04622 RIG-I-like receptor signaling pathway
    102231253
   04625 C-type lectin receptor signaling pathway
    102231253
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    102231253
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102231253
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102231253
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xma04052]
    102231253
   00536 Glycosaminoglycan binding proteins [BR:xma00536]
    102231253
Cytokines and neuropeptides [BR:xma04052]
 Cytokines
  Tumor necrosis fators
   102231253
Glycosaminoglycan binding proteins [BR:xma00536]
 Heparan sulfate / Heparin
  Cytokines
   102231253
SSDB
Motif
Pfam: TNF Sigma70_r2
Other DBs
NCBI-GeneID: 102231253
NCBI-ProteinID: XP_005804552
Ensembl: ENSXMAG00000016607
UniProt: A0A3B5QJJ1
LinkDB
Position
13:complement(25221956..25225508)
AA seq 245 aa
MESEFKVLLDADASTGTSDQTQTSTRVKTFQVSRLTLALMAFTLCLATGGAVFLFSNARV
KSEGSDEGSSAFHHALRQISNRRAAIHLEGEHDPAINTSVKWMSKVNQAHSQGGLELKDN
EILIPHNGLYFVYSQASFRVSCSSNADDLISNHMIHLSHTVKRWSRSFGSNDESSYRTLL
HSVRTVCQGTASKDPDSAGSRFTAVYMGAVFDLKSGDRLKTVMEEKMLEKLEEDAGKTYF
GVFAL
NT seq 738 nt   +upstreamnt  +downstreamnt
atggagagtgaattcaaggtgttactggatgcagatgccagcacagggacaagtgatcag
actcagacatccacgagagtcaaaacatttcaagtgtccagacttaccttggccctgatg
gctttcactctctgccttgctactggtggtgctgttttcctcttctctaatgctcgtgtc
aagagtgaaggatcagacgagggaagctctgcttttcatcacgccttaagacaaatttca
aacaggagggcagccattcatctagaaggagaacacgaccccgccataaatacgtcagtg
aagtggatgagcaaagtgaaccaggcacactctcaaggaggtctagaactaaaagacaat
gagattttgattcctcataatggcctctactttgtttacagccaggcgtcgttcagagta
agctgcagcagcaatgctgatgaccttatttccaatcacatgatccacctgagtcacaca
gtgaaacgctggtccagatcatttggctctaatgatgagagttcctatcggaccctcttg
cattcagttcgtaccgtgtgccagggtacagccagtaaggatccagactcagctggaagc
cggttcacggcagtatatatgggagcagtattcgacttaaagagtggggacagactgaag
acggttatggaagagaagatgcttgagaaacttgaggaagatgcagggaagacttatttt
ggtgtctttgccttgtaa

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