Xiphophorus maculatus (southern platyfish): 102232824
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Entry
102232824 CDS
T02923
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog
KO
K19656
intraflagellar transport protein 122
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xma03037
]
102232824 (ift122)
Cilium and associated proteins [BR:
xma03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
102232824 (ift122)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_IFT122_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
Zn_ribbon_IFT122_C
Zn_ribbon_IFT122
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
TPR_IF140-IFT172
WDR90_beta-prop_4th
Beta-prop_Vps41
TPR_GEMI5
Beta-prop_WDR35_TULP_N
TPR_IFT80_172
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
TPR_7
eIF2A
Beta-prop_HPS5
TPR_COPA_B
WD40_RFWD3
Beta-prop_SPT8
TTC7_N
TPR_2
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
102232824
NCBI-ProteinID:
XP_023189486
Ensembl:
ENSXMAG00000017357
LinkDB
All DBs
Position
1:complement(20561616..20589110)
Genome browser
AA seq
1180 aa
AA seq
DB search
MRPIEKWKETVRDRVYDLAFKPDGSQIIMAAGQRVLVCDAKDGTIIQPLKGHSDTVYCVA
YARDGKRFASGSADKSIIIWTSKLEGILRYTHNDAIQCVAYNPITHQLASCSSGDFGLWS
PEQKSVNKNKVSSRITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGGSLSPIW
SIAWNPSRDDHDTLAVADWGQKLSFYQLSGKQVLKERTLNYDPCCISYFSKGEYIVMGGS
DKQVSLYTKDGVRLGTIGEHKAWVWTCRVKPDSNYVVCGCQDGTIYCYQLNFTTVHGLYK
DLYAYRDNMTNVIVQDLITEQNLRIKCHELVKKIAIYRNRLAIQLPEKINICTDDLSTME
YRITDKICKKFECNLLVVCSQHVILCQEKRLQCLSFAGVKEKEWVMESMIRYIKVIGGPP
CKEGLLVGLKNGAILKIFIDNPFPITLLKLSLSVRCLDMSASRKKLAVVDERNTLLVYDI
KSKELLFQEPNANSVAWNTQCEDMLCFSGNGYLNIKASNFPVHQQKMQGFMVGYNGSKIF
CLHVYSMSAVEVPQSAPMYQYLEKKMFKEAYQIACLGVTDSDWRDLATEALEGLDFETAK
KAFIRIRDLRYLELISSIEERKKRGENDNELFLADVYAFQGKFREAAKLYKRAGHESKAL
SMYTDLRMFEYAKEFVGATDPQSSKLLITKQADWAKCSKEPRAAAEMYLSAGEHAKAIDI
IGEHGWADMLIDIARKLDKAEREPLAKCAMHFKRLRHHGYASETYSKMGDLKALVQLHVE
TRHWEEAFSLVEKHPQFKYDVFVPYAQWLAENDRFEEAQKAFHKAGRQNEAVKVLEQLTH
NAVVENRFNDAGYYYWMLSMQCLDIARENEEQKKEMLEKFESFQHLAELYYVYSSIQRYT
DEPFSSHMPETIFSLCRFLLNNLTKDVLPGISKVNTLFALAKESCKLGAYKLARYSYEKL
QELHIPSRLVESIELGSLTIHSKPFHDSEDFIEDMMCYRCSTNNPLLNSRGSVCINCRQP
FIYSASSYEVLPLVQFYLGEGISDEEALSLIDLEVPHTEDCKARGPNVGSGDLEALRIDD
ELDHTDDDPFSAKMSFEQGGSTFVPVKVSRSVLRSMSRRDVLIKRWPKPLKWEYFRSLLP
DVSITMCPSCFKMFHSEDYEILLLQHNCCPYCRRPIDEPS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaggccaattgaaaaatggaaagagacggttcgtgatcgtgtttatgacctcgccttc
aagccagatggcagccaaattataatggctgcagggcaacgtgtgctggtctgcgatgcc
aaagatgggacaattattcagcctttaaaaggacacagtgatacagtgtactgtgtggcc
tatgccagggatggtaagaggtttgcctcggggtctgcagacaaaagcattatcatttgg
acttctaaactggagggtattttaagatatacccacaacgatgcaatccagtgtgtcgcc
tacaacccaatcactcaccaacttgcttcctgctcatctggtgactttggcctgtggtcc
cctgaacaaaaatctgtaaacaagaataaagtgagtagcagaataacatgctgtgggtgg
acaaacgatgggcagtacctcgcccttggcatgatgaatggtgtggtgagcatacggaac
aagaatggagaagagaaggtcaagatagagcgtccaggaggatctttatccccaatctgg
tcaatagcgtggaatccatccagggatgatcacgacacactggctgtggcagactggggt
cagaaactctccttctaccagctcagtgggaaacaggttttaaaagagagaactctaaac
tacgacccctgttgcatcagctacttctccaagggcgagtacattgtgatgggtggctca
gacaaacaggtgtccctctatactaaagatggtgtgcggttaggaaccattggagagcat
aaagcatgggtgtggacatgccgagttaagcccgactccaactacgtggtgtgtggctgc
caggatgggaccatctattgctaccaactaaacttcaccacagttcacggcctctacaaa
gacctctacgcatacagagacaacatgaccaatgtcatcgtgcaggacctcatcactgag
caaaacctgagaatcaaatgccatgagttggtaaagaaaatcgccatctacagaaaccgc
ctggccatacagctacccgagaagatcaacatttgcacggacgacttatccaccatggaa
taccgcattactgacaaaatctgcaaaaagtttgagtgcaacctgctggtggtctgctcc
cagcacgtcattctctgtcaggagaaaaggctccagtgcctgtcttttgccggtgtcaag
gaaaaagaatgggtgatggaatctatgattcgttacatcaaagtgattggtggcccgcca
tgcaaagagggtctacttgtggggttaaaaaacggagctatcttgaagatatttatcgac
aacccctttccaataacgctgctgaagctgtcgttgtcagtgcgctgcctggacatgagc
gcgtcccgcaaaaagctggctgtggtggatgaacgtaacaccctcctcgtctatgacatc
aaaagcaaagaactactttttcaggagcctaatgctaacagtgttgcctggaacacgcag
tgtgaggacatgctgtgcttctctgggaacggctacctgaacatcaaggcgagcaacttt
cctgtgcaccagcagaaaatgcagggctttatggtcggctacaacggctcgaaaatattc
tgtctccacgtctattccatgtctgctgtcgaggtgcctcagtcagcacccatgtaccaa
tacctagagaagaagatgtttaaggaagcttatcagatcgcctgtctcggtgtgacagac
agtgattggagggatttagccacagaagctctggagggacttgactttgaaaccgccaag
aaggcctttattagaataagagacctgcgctacctggagctgatcagcagcattgaggag
aggaagaagcggggcgagaacgacaacgagctcttcctggcagacgtctatgccttccag
gggaaattccgcgaggcagctaagctctacaaacgcgccggccatgaatccaaagctctg
agcatgtacaccgacctgcgcatgttcgagtacgccaaggagtttgttggtgctacagac
ccacagagctcaaagttactaataacgaagcaggcagattgggctaaatgcagcaaggag
ccacgagctgcagctgaaatgtacctgtcagcaggagaacacgcgaaagctatagatatt
attggagaacacggctgggcagacatgctgatcgacatcgcccgtaagctagacaaggct
gagcgtgaaccgctggcgaagtgtgcgatgcactttaagaggctgagacaccatggctat
gcctcagagacttattccaagatgggggacttgaaggctttggtgcagctgcacgtggag
acgagacactgggaagaggccttctcgctggtggagaagcacccacagttcaaatatgac
gtctttgtgccttacgcccagtggttggctgaaaacgatcgctttgaggaggcacagaaa
gcatttcacaaggccgggcgtcagaatgaagcagtaaaagtcctggagcagcttacccac
aatgcagtggtggagaacaggttcaacgacgcaggctactattactggatgctgtctatg
cagtgtttggacattgcccgagaaaacgaagaacagaaaaaggaaatgctggagaagttt
gagagctttcagcatcttgctgagctttattacgtctatagctccattcagcgttacacg
gatgaaccttttagttcccacatgccagagacaatcttcagcctctgcaggttcctgctg
aacaacctcaccaaggatgtacttccagggatttctaaagtcaacaccttgtttgctctg
gccaaggagagttgcaaactgggagcgtataaattggccagatattcctacgagaagctg
caggagcttcacattccctcacgcttagtggagtccatagagctgggcagcctcacaatc
cactccaagcccttccacgacagcgaggactttattgaagacatgatgtgctaccggtgc
tccacaaacaacccgcttctgaacagcaggggcagcgtgtgcatcaactgcaggcagcct
ttcatctactccgcttcgtcatacgaggtgctgcctctggtgcagttctacctgggggag
ggaatcagtgatgaggaagctctgtccctcatcgacctggaggttcctcacacagaagat
tgcaaagcacgaggccccaacgtgggcagcggtgacctggaggctttgaggatagacgac
gagttggatcatacagacgacgatccgttttcagccaaaatgagcttcgagcaagggggc
tccacctttgtccccgtcaaggtgagccgttcagtgctgcgctccatgagcagaagggac
gtcctgatcaaacgctggcccaagccgctcaaatgggaatacttccgctccctgctgccg
gatgtgagcatcaccatgtgccccagctgcttcaagatgtttcacagtgaagactatgag
atccttttgctgcagcacaactgctgtccttactgccgccgacccattgatgaacccagc
tga
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integrated database retrieval system
