Xiphophorus maculatus (southern platyfish): 102233459
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Entry
102233459 CDS
T02923
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like isoform X2
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
xma
Xiphophorus maculatus (southern platyfish)
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102233459
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102233459
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
102233459
NCBI-ProteinID:
XP_014324739
Ensembl:
ENSXMAG00000017679
LinkDB
All DBs
Position
10:14349380..14372204
Genome browser
AA seq
1875 aa
AA seq
DB search
MANLLPPPGIAVFRPFTQESLAEIKRLAEERRKSAEGHGEGEPVGPHPDLEAGKSLPLIY
GDPPPELLNTPLEDLDPFYKAQNTFVVVSKGNTIYRFNAEPACYILSPFSVIRRGSIKIL
IHSLFSMFIMITILSNCVFMTMSNPPAWSKTVEYVFTGIYTFEATVKVLSRGFCIGSFTF
LRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVK
KMGDVMVLTVFALAVFALVGLQLFMGNLRHKCVQWPILMNDVFNTTMAVNESMYSNSSFD
FTEYIENPENQYFTEGSKDALICGNSSDAGKCPEGYTCMKAGRNPNFGYTSYDSFGWAFL
ALFRLMTQDFWENLFQLTLRAAGRTYMLFFVVVIFLGSFYLINLILAVVAMAYYEQNQAT
QLEAIEKEEEFQRLLEQLKNQEQAQFHGSQATLTSKKSVSQHTLSETEDNGHGLKQGEAV
NDCNGRVVPRLMIRAPTMQESAVDYEVKEKSLGSMHSTLHLEEPGLKKRSASAVTVLSAV
AMEELEEAQRPCPPCWYKFADMFLKWDCCPTWIVFKKWMHFVVMDPFVDLAITICIVLNT
LFMAMEHYPMTPEFDNMLSVGNLVFTGIFAAEMFFKLIAMDPYYYFQVGWNIFDSIIVTL
SLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKNYKDCVCKISSDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCMEV
AGPAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSAGDDDGDMNNLQIAIGRITRG
IDWLKAFLIQRIQQILGKKPEEPDKDMVDDGKPKTEEMEMNHLDACLTLKVADGISDGPV
QSQPSGFTVDGELNLKVPIAEGESDYDNLSDNVDDDDDGEQDDDEEDNELPKSALRRDDE
QNTKNLEDESSIPEKVKYDDGDSSVCSTADYHPPEPEPEKKEEEEPEPEEPEACFTDDCV
TKWPCLTVDTTSDKGKKWWNLRKTCFTIVEHDWFETFIIFMILLSSGALAFEDIYIERRR
TIKIILEFADKIFTYIFVIEMLLKWVAYGFKTYFTNAWCWLDFFIVDVSLISLVANWMGY
SDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGV
NLFAGKFYRCINTTTEELFPMTEVNNRTECLALEEATQEARWINVKINYDNVGTGYLSLL
QVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNF
NQQKKKFGDQDIFMTDEQKKYYEAMKKLGSKKPQKPIPRPTNPVQGIVFDFISQQFFDIF
IMVLICLNMVTMMVETDDQSPEKEDFLFKLNVAFIVVFSGECVLKLFALRQYFFTNGWNV
FDFIVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMS
LPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAGIDDIFNFETFGGSIICLFQITTSAGW
DGLLLPMLNREPPDCDPEFENPGTDVKGNCGNPGMGMMFFCSYIIVSFLVVVNMYIAIIL
ENFNVAQEESGDPLCEEDFEMFNETWEKFDLDGTMFIEYSRLSDFCDTLQEPLRVAKPNR
LRLIGMDLPLVIGDRIHCLDVLMAVTQMVLGDTVEMAAMRDSIEAKFILSNPTKDSFAPI
TTTVRHKEEQQAAVVLQRAYRNHLLKRCIRHAAFMHRLKRIGRNYNDDDPPEKEGLLARR
LGVLYKSNIDLADEMELEALETLTSQEPFNTDCLQEPPVQNMIVVPAEITSEELLHSASY
QHPLTLQANLREPLV
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacctgctccctcccccaggcattgcggtcttccgcccgtttacccaggaatca
ctggcggaaatcaagaggcttgcggaggaaaggaggaaatcagcagaaggccatggcgag
ggagaaccagtggggccacaccctgatctggaagctggaaagagcctacccctaatatat
ggagaccctcctccagagttgctcaacacgccgctggaggacctggaccccttctacaaa
gcccagaatacatttgtcgtggtcagcaaagggaacacgatttacaggttcaacgctgag
ccggcttgttacattctcagcccctttagtgtgatcaggagaggatccatcaaaattctc
atacattcattatttagcatgttcatcatgattaccattctgtcgaactgtgtgttcatg
acgatgagcaacccaccagcatggagtaaaactgtggaatatgtttttacaggaatttat
acctttgaggctacagtcaaagtgttgtcaagaggtttctgtattggttcttttacattc
cttcgagatccatggaactggctggatttcatggtgatcagcatggcctacattactgag
tttgttgaccttggcaatgtgtcagctctcaggacatttcgtgtacttcgagcactgaaa
acaattaccgtaattcctggcctgaagaccatagtgggggctttgatccagtcggtgaag
aaaatgggggacgtcatggtcctgaccgtttttgcccttgcagtctttgcactcgttggc
ctccagcttttcatgggaaacctgcgtcacaaatgtgtgcaatggcccattctgatgaat
gacgttttcaacactaccatggctgtaaatgagtctatgtactccaacagttcttttgat
tttactgaatatattgaaaatccagaaaatcagtattttacagaaggcagcaaagatgct
ctgatttgtggcaacagctctgatgctggaaagtgcccagaaggatacacatgtatgaag
gctggaaggaaccctaactttggctacaccagttatgactcttttggatgggccttcctt
gctctgttcaggctcatgacacaggacttctgggagaatcttttccagctgactctgcga
gcagctgggaggacatacatgctgttcttcgtggtggtcatcttcctgggctccttttac
ctcatcaacctcatcctggctgtggtagccatggcttattatgaacagaatcaagcaact
caactggaggccatcgaaaaagaggaagaattccagcggcttttagaacaactaaaaaat
caagagcaggcacaatttcatggaagccaagccaccctgaccagtaagaagtctgtgagt
caacacacattatctgagacggaagataatggacatggtctcaaacagggtgaggctgtg
aatgactgcaatggaagagttgttcctcgcttgatgattcgagcacccactatgcaggag
tctgctgtagattatgaagtcaaagagaagtcactgggctcgatgcacagcacacttcat
ctggaagaacctggcttgaaaaagagatctgctagtgctgtgacagtgctgtctgcagtt
gccatggaagagttggaggaggctcagagaccctgtccaccttgctggtacaaatttgcc
gacatgtttttgaagtgggattgctgccccacctggattgtttttaaaaagtggatgcac
tttgtggtcatggatccctttgttgacctcgctattaccatatgcattgtgctcaacacc
ctttttatggcaatggagcactaccccatgaccccagagtttgacaacatgctctcagta
ggaaatctggttttcactgggatctttgcagctgaaatgtttttcaagcttatcgccatg
gatccctattactatttccaagttggatggaacattttcgacagcattattgtaactctc
agcctggtggagttgggtctggcaaatgtccagggtctatcagtcctaaggtcattccgt
ttgcttcgtgtcttcaaactggcaaagtcttggcccacactcaacatgctcattaagatt
attggtaactcagtgggagctttggggaacctgaccttggtgctggccatcatcgtcttc
atttttgctgtagtgggcatgcaactctttggaaagaactacaaggactgcgtatgcaag
atctcctcagactgtgagctgccacggtggcacatgaatgacttcttccattccttcctc
atcgttttccgcattctgtgtggcgagtggatcgagacgatgtgggactgcatggaggtg
gctggacctgcgatgtgcttaatcgtcttcatgatggtcatggtcattggaaatctagtg
gtattgaacctcttcttggcgttgttgctcagctcattcagcggagacaacctatcagca
ggggatgacgatggagacatgaacaatctgcagattgctattgggagaatcacacgaggc
atcgattggttaaaagcatttctcatacagcgaatccagcaaatacttggtaaaaagccc
gaagagccggataaggacatggtggacgatggaaagcctaaaaccgaggaaatggaaatg
aatcatttggacgcctgtctgactcttaaagtagcagatgggatttcagatggcccggtg
caaagccaaccctctggattcacggtggatggagagctcaatctgaaagtcccaatcgct
gaaggagaatcagattatgataatctgagtgataatgttgatgatgatgatgatggggag
caggatgatgatgaagaagataatgaacttccaaagagtgcactgcggagagatgatgaa
caaaatacgaaaaaccttgaagatgaaagtagtatcccagagaaagtaaaatatgatgac
ggggattcttcagtatgcagcacagctgattatcatcctcctgagcctgaaccagaaaag
aaggaagaagaggaaccggaacctgaagaaccagaggcctgcttcactgatgactgtgtg
accaaatggccatgtttgacggtggataccaccagtgacaaaggcaaaaaatggtggaat
cttagaaaaacttgcttcaccatagtggaacacgactggtttgaaaccttcatcattttc
atgatcctccttagcagtggggctctggcctttgaagatatatacatagaaaggcgacga
accatcaaaataattcttgagtttgcagacaagattttcacctacatttttgtcattgag
atgctcctgaaatgggttgcatatggtttcaagacctacttcaccaacgcttggtgttgg
ttggactttttcattgtggatgtttccttgattagcttagttgcaaattggatgggctat
tctgaccttggtccgataaagtcgttgagaaccctcagagcactgaggcctcttcgagcg
ctatcaagatttgaaggcatgagggtggtggtgaatgctcttgttggagcgattccctcc
atcttcaatgtcctgctggtgtgtctgattttctggctcatcttcagcatcatgggagtc
aatttgtttgcggggaagttctaccgttgcatcaacaccaccacagaggagctattcccc
atgactgaggtcaacaatcgaaccgagtgcttggcacttgaagaagccacacaggaggct
cgctggattaacgtcaaaatcaactacgacaatgttgggacaggctacctctctctgctt
caagtggcaacttttaaaggttggatggacataatgtatgctgccgtggactcaagagag
gttgaggagcaaccatcctacgaaatcaatctttacatgtacatatattttgtgatcttc
atcatctttggttccttcttcaccctaaacctcttcattggtgtcattattgacaatttc
aatcaacaaaagaaaaagtttggagaccaagacatttttatgactgatgaacagaaaaaa
tactatgaggccatgaagaaacttggttccaagaagccacaaaagccaattccacgacca
acgaatccggtccagggcattgtgttcgatttcatcagccagcagttttttgacatcttc
attatggttctaatctgcctcaatatggtgaccatgatggtggaaacagatgaccaaagc
ccagagaaagaggattttctctttaaattaaacgtggccttcattgttgtcttctctgga
gagtgtgtattgaagctctttgcgttgcggcagtacttcttcaccaatggatggaatgtt
tttgatttcattgtggtcatcttgtcaatagctggtacaatgctctcagacataattgag
aagtactttgtatccccaactctcttcagagtgatcagactagccaggattggcaggatt
ctgcgcctcattaaaggagcgaagggtattcgtacacttctctttgccctaatgatgtcc
cttcctgccctgttcaacattggtctcctgcttttcctgattatgttcatcttttccata
tttggcatgtcaaattttgcctatgtcaagaaagaagctggaattgatgacatttttaac
tttgagacctttggtggcagcattatctgcttgtttcagattacaacctctgctggttgg
gatgggcttctacttccaatgctgaacagggaacctccagactgtgaccctgaatttgag
aatccaggcacagatgtgaagggtaactgtggaaacccggggatgggtatgatgttcttc
tgcagctacattatcgtttcgttcttagtggtggtcaacatgtacattgccatcatcctg
gagaacttcaatgtggctcaagaagagagcggtgacccactttgcgaggaagactttgag
atgttcaacgaaacttgggagaagtttgacttggatggaacaatgtttattgagtacagt
cgactttcagatttttgtgacactttgcaggagcctctcagggtcgccaaacccaatcgg
cttcgtctgattggaatggatctgcccctagttattggggataggatccactgcttggat
gttttgatggctgttacacagatggtactgggagacacagtggagatggcagcaatgcgg
gatagcattgaggctaagttcattcttagcaaccccacaaaagactcctttgcaccaatt
accacaacagtacgccacaaggaagagcaacaagctgctgtggtccttcaacgagcttat
cgtaatcatcttctgaagcgctgcatacgccatgctgctttcatgcacagattgaaaaga
attggtagaaattacaacgatgatgatccacctgaaaaagaggggctgcttgcacgaaga
ctaggagttctctataaaagtaatatagaccttgctgatgaaatggagcttgaggcttta
gaaactctgacaagccaagaaccttttaatacagactgtcttcaggagcctcctgtgcag
aatatgattgtggttcctgctgaaataaccagtgaggagttattgcattctgcctcctac
caacatcccttaaccttacaggcaaatctgagagagccgcttgtatga
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