Xiphophorus maculatus (southern platyfish): 102234631
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Entry
102234631 CDS
T02923
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04620
Toll-like receptor signaling pathway
xma04621
NOD-like receptor signaling pathway
xma04622
RIG-I-like receptor signaling pathway
xma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102234631 (traf3)
04621 NOD-like receptor signaling pathway
102234631 (traf3)
04622 RIG-I-like receptor signaling pathway
102234631 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102234631 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
zf-RING_4
FapA
DUF4201
GAS
Leu_zip
zf-RING_UBOX
zf-C3HC4_4
TolA_bind_tri
KxDL
Sina_ZnF
zf-RING_2
zf-TRAF_2
HOOK
BLOC1_2
TMF_DNA_bd
Mis12
zf-RING_6
ATG16
DivIC
Prefoldin_2
DUF3450
CCDC138_cc
Crescentin
Fzo_mitofusin
EzrA
Snapin_Pallidin
Fez1
ADIP
DUF1664
LURAP
SHE3
Knl1_RWD_C
Uso1_p115_C
MctB
Motif
Other DBs
NCBI-GeneID:
102234631
NCBI-ProteinID:
XP_023208926
Ensembl:
ENSXMAG00000018391
LinkDB
All DBs
Position
19:complement(20480431..20496124)
Genome browser
AA seq
590 aa
AA seq
DB search
MSSGRSANGREVQIPLQQVAPSLVAPLPITPPSHRSTNPWPPCDLTPQPSAPAGFQPLHG
GFRDVFVEKPEAKYCCEACRRVLCEPRQTECGHRFCQSCINDILSHSNPVCPADREPLFK
DKIFRDVCCHREIMALKVFCRSKANGCQEQMSLQQIPDHLNVCPFFEVPCPLGKCKERMM
RKEIPEHLAWKCKHRESTCEFCMTKMPLTDLQKHKETVCPSFPVSCPNHCSFSSLPRSEL
TSHQHDCPKAQVSCQFHRYGCTFKGLNQEMRQHDSTFVAEHLRMMVKGNCLLENKVDNVK
EELMERCKVLPALNSRLSELESQNEELREKNRQMEQKLANLQKMMSSHSETLMALEIELG
SLRRLREEVETLRGTVDNVRTRLATLEQGGRSGSGSTHTFASLETQLNRHDDMLSVHEIR
LADMDLRFQVLETASYNGTLIWKIRDYKRRKQEAVAGKTLSLYSQPFYTGYFGYKMCARV
YLNGDGMGKGTHLSLFFVVMKGEYDALLPWPFKQKVTLMLMDQTPSRKHLGDAFKPDPHS
SSFRRPTAEMNIASGCPLFVAQSVLETGNYIKDDTIFIKVTVDTSDLPDP
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagggagaagtgctaatgggagggaagtacagatacccctccagcaggtggcg
ccttcacttgttgctcccctcccaatcacaccaccctcccaccgctcaaccaatccctgg
cctccatgcgatctcactcctcaaccaagtgctcctgcagggttccagcctcttcatgga
ggatttcgagatgtgttcgttgagaagccagaggccaaatactgctgcgaggcgtgcagg
cgggtcctgtgtgagccccgccagaccgagtgtggacaccgcttctgtcagagctgcatc
aatgacatcctcagtcactcaaacccagtgtgtccggctgacagggagcccctgttcaaa
gacaagatctttagagacgtatgttgccatcgagagattatggcgctgaaggtcttctgt
cggagtaaagctaacggctgtcaggagcaaatgagtctgcagcagatacctgaccacctg
aatgtgtgtccgttcttcgaggttccctgtccgctggggaaatgtaaagagaggatgatg
aggaaggagattcccgagcacctagcgtggaaatgtaaacacagagagagcacttgtgaa
ttttgcatgaccaagatgcctttaactgacctccagaaacacaaagagactgtgtgtccg
tcgttccctgtgtcctgtcccaaccactgctccttctcttccctgccccggagtgagctg
accagccaccagcacgactgtcccaaagcccaggtcagctgtcagttccaccgctacggc
tgcaccttcaagggcttaaatcaagaaatgaggcagcatgactccaccttcgtagccgag
catctaagaatgatggtcaaagggaactgcttgttggagaacaaggtggacaacgtaaag
gaagagctaatggagcggtgcaaggtgcttcctgctctcaacagccgactgtcggagctg
gagagccagaacgaagagctgcgggaaaagaaccggcagatggagcagaagctggccaac
ctacagaaaatgatgagctcgcattcagagacgctgatggcgttggagatagagctcggt
tcactgcgtcgactaagagaagaagtggaaaccttacgaggaacggtggacaacgttcgg
actcggctggccaccttggagcagggtggacggagcggatccggatccactcacaccttc
gcgtccttggaaactcagctcaatcggcacgacgacatgctgagcgtccatgaaatccgt
ttggctgacatggacctgaggttccaggtactggagacggctagctacaatgggactcta
atctggaaaatccgggactacaagagacggaaacaggaagccgtggcaggaaagacgctg
tcgctgtactcacagccgttttataccggatatttcgggtacaagatgtgcgctcgggtt
tacctaaatggagacggcatgggcaaggggacgcacctgtcgctgttctttgtggtgatg
aagggcgagtacgacgccctgctgccctggcccttcaagcagaaggtgactctgatgctg
atggaccagactccttccaggaagcacctgggcgacgccttcaagcccgatccgcacagc
agcagcttcagacgccccacggctgagatgaacatcgcctccggctgccctctgttcgtg
gctcagagcgtcctggagacgggcaactacatcaaagatgacaccatcttcatcaaggtc
accgtggatacgtccgacctgcctgacccatga
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