Xiphophorus maculatus (southern platyfish): 102236609
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Entry
102236609 CDS
T02923
Name
(RefSeq) zinc finger protein GLI2 isoform X1
KO
K16798
zinc finger protein GLI2
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102236609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xma03000
]
102236609
Transcription factors [BR:
xma03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
102236609
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
102236609
NCBI-ProteinID:
XP_005811594
Ensembl:
ENSXMAG00000006443
LinkDB
All DBs
Position
24:complement(14486017..14535802)
Genome browser
AA seq
1328 aa
AA seq
DB search
METSSPPAAQKKDKMDGSSFSDLPKKPSPSETRAPQHLFPTFHTPIPIDIRHHEGRYHYE
PHALHAMHSPAGLTGSPVISDISLIRLSPGAMATSESPFSPPHPYVSPHMEHYLRQVHGS
PTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPPPPGAGAAEYYHLMASHRSPYGELL
LPGPGAPLADYLSPVDVSRFSSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVA
YINNSRSSSAASSSYGHLSVGGLSPSFPFPHPINPMAYQQLLSQQRGLSAFGHNPPLVHP
PPTFSSRQPGLGLSCLPTSTHNNDVSSKNHGGDSAVSSSVDPINKRSKVKAELDGMKPGS
PLSPNHYSGAQDLKEDVERDECKQEAEAVYETNCHWDGCSQEYDTQEQLVHHINNDHIHG
EKKEFVCRWDDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHLR
SHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHV
KTVHGPEAHVTKRQRSDLPPRPPRENGENERAARLHREDKLLENSSPRVTEEYLHMKSIK
TENPVMHQSSPGGQSSCSSEPSPLGTNNDSGVETAAHSGGSLGDLSALDDLPFLDSVDFS
GGVAAVGLHLRKQLSGSQCLENLKKEKLKAVRDSCRWANNPTPPAHQGTTLPPIPTSGSL
LENSSLCGDPASFPGSGKMTLLGNLSERRDSTSSTFSSVYTLSRRSSGISPGFSSRRSSQ
TSQFAANRLTNISSADSYDPISADISRRSSQASQFGGNNSGPGAASPLTLTPAQHYRLKA
KYAAATGGAPPTPLPYPDQSCLKEFNEYSSKNSLRSLQFSKERSLMPHEVPSNIPRRASD
PVRPLDPLNQPPLHRFNSMVSLNRRVSLQPHPPPAKDHRRLSQQVYAQPNVSPRGFPHGL
QPASISEDITMQTRRCNGNPSGQGDFHGAGGGQQQLYHQRRMDGPNKSPLMSPSSPHGGA
ASGQWNMDTTQQYSRLDPRGNLIVVQQNQNAGSFSGTSHQQIVQHFNNRCMKPGQHHFQQ
SSNLNEASSPQHRFSQSSYDRNGKAPYPPCGNILHCKEEPVDMDFGQLQPAQIKTESCDS
STMTLDQQNCNMTGFRTGNQNHPQLRPPTEPNSPNVSIPKVLTPPDDSQLSSSRVSELSY
ISEDNALFYTGQIRVLEPNGNLDCHVSLLVSSPSAAPADNQRSRTAPEHPQIDFDSMLDD
GDHSSLMSGTLSPGLLQSFSQSSSRLTTPRSSVTLPSVPTGTGNMAVGDMSSLLSALAEE
NKFLNLIS
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcgtcaccgccagccgcacagaaaaaggacaaaatggacggcagcagcttc
agcgacctccccaagaagccgtcgccctcggagaccagagcgccgcagcacctcttcccc
accttccacacgccgatccccatcgacatccgccatcatgagggccggtaccactacgag
ccgcacgcgctgcacgccatgcacagccctgcaggtctgaccggcagccccgtcatctct
gacatctccctgatccgcctgtcgcccggcgccatggcgaccagcgagtcgccgttcagc
ccgcctcacccgtacgtgtcgccccacatggagcactacctgcgccaggtgcacggcagc
cccaccctgtccatgatctcagccgccagaggcctcagcccagcagacctggctcatgag
catctgaaggagcgcggcctgtttggccttcctcctcctcctcctcctcccccgggggcc
ggcgcggcggagtactaccacctgatggccagccaccgcagcccctacggcgagctgctg
ctgccggggcccggggccccgctggccgactatctctctcctgttgacgtgtcccggttc
tccagccccagactgacgcccagactcagcaggaagagggcgctgtccatctcgccactg
tccgacgccagcatcgacctccagaccatgatcagaacttcgcccaactccttggtggcg
tacatcaacaactcgcggtccagttcagccgccagcagctcctacggacacctgtcggtc
gggggactcagcccgtcgtttcccttccctcaccccatcaaccccatggcctaccagcag
ctcctgtcccagcagcgcggcctcagcgccttcggccacaacccgcccctcgtccaccct
ccacccactttctccagtcgccagccgggcctcggcctctcctgcctgcccacctccacc
cacaacaacgacgtgtcatccaagaaccacggaggagactctgctgtcagcagctcggtg
gatcccatcaacaaacgctccaaagtgaaggcggagttggacggcatgaagccgggatct
cctctgtcaccgaaccactacagcggcgctcaggacctgaaggaggacgtggagcgagac
gagtgcaagcaggaggccgaggccgtttacgagaccaactgtcactgggacggctgcagc
caggagtacgacacgcaggagcagctggtgcatcacatcaataacgaccacatccacgga
gagaagaaggagttcgtgtgccgctgggacgactgctcgcgggagcagaagcccttcaaa
gcgcagtacatgctggtggttcacatgcgccggcacacgggggagaaaccacacaaatgc
acgttcgagggctgctccaaggcctactcccgcctggagaacctgaagacccatctgcgc
tctcacaccggggagaaaccctacgtctgcgagcacgaaggctgcaacaaggccttctcc
aacgcctcggaccgggccaagcaccagaaccggacgcactccaacgagaaaccgtacgtg
tgtaaaatcccgggctgcaccaagcgctacacggaccccagctctctcaggaagcacgtg
aagacggttcacggcccggaggcccacgtcaccaagaggcagcgcagcgacctgccgccc
agaccccccagggagaacggcgagaacgagagagccgccaggctccacagggaggacaag
ctgttggagaacagctcccccagagtcacggaggagtacctgcacatgaaatccatcaag
acagaaaaccctgtgatgcatcagtccagtcctggcggtcagtcatcgtgtagcagcgag
ccgtcaccacttggcaccaacaatgacagtggagtagaaacagcggcgcacagcgggggg
agcctgggggacctcagcgcgctggacgacctgccgttcctggactctgtggatttctcc
ggcggggtcgcagcggtcggcctccatctcagaaagcagctgagcggcagccagtgcctg
gagaacctcaagaaggagaagctgaaggcggtacgggactcgtgtcggtgggccaacaac
ccaacaccccctgctcatcaagggaccacgctgccgcctataccgacaagcgggtccctc
ctggaaaattcaagcctgtgtggagatccagcctccttccccggctctggcaaaatgact
ctgctgggaaacctttctgagcgcagagacagcacttccagcaccttcagctcggtctac
acgctcagccgccgctcctcaggcatctcccctggtttctccagtcgacgctcgagccaa
acttctcagtttgctgccaaccggctgacgaacatcagctcagcggactcctacgacccc
atctctgctgatatttctcggcgctccagtcaggccagtcagtttggggggaataatagt
gggcctggggctgccagccctctcaccctgaccccagcccagcactaccgactgaaggca
aaatatgctgctgcaactggtggtgcacctcctacacctcttccatacccggatcaatca
tgtctgaaggaattcaatgagtactcgtccaaaaacagcctccgatccttacagttcagc
aaggaacggagcttgatgccccatgaagtaccttccaacattccccgtcgagccagtgac
cctgtgagacctttagatcctctcaaccagcctcctctacatcggttcaacagcatggtc
tcactcaaccgaagggtctccttgcagcctcatccccctcctgcaaaagatcacagacgc
ttatcccagcaagtgtatgcacaaccaaacgtcagtccccgtggtttccctcacggcctg
caaccagcaagcatttcggaggacatcaccatgcagacaagaaggtgcaatggaaatccc
tctggtcagggagatttccacggagctggcggcggccagcagcagctgtaccaccagaga
cggatggatgggccgaacaagagtccactcatgagtccatcctcaccacacggcggtgct
gctagtggacagtggaacatggacaccacccagcagtattccaggctagatccacgtggg
aatctgattgtcgtccaacagaaccagaacgctgggtctttcagtgggacctcccaccag
cagatagtccaacacttcaacaacagatgcatgaaacctggacagcaccacttccagcag
tcctcaaacctcaatgaagcttctagccctcagcacaggttcagtcaaagttcctatgac
aggaatggcaaggctccgtatccaccctgtgggaacatcctgcactgtaaggaggagcca
gttgacatggactttggtcaactccagcctgcgcagataaaaactgagagctgtgattca
tccaccatgactttagaccagcagaactgtaacatgactggtttccggactgggaatcag
aaccatccccagctgagaccaccaacagaacctaactctccaaatgtctcaataccgaag
gtgttgacgccaccagatgattcccagctctcctctagtagagtttctgaactctcttac
atctctgaggacaacgctctgttctacacgggtcagatccgagtcctggagcccaacggg
aacctggactgtcacgtttcccttctggtgagctctccttcagctgctccagccgacaac
cagaggagcaggactgcacctgagcaccctcagatagactttgatagcatgctggacgat
ggggatcactccagcctcatgtcaggaaccctgagtccaggacttctccagagtttctcc
cagagttcgtctcgcctcacgacgccccggagctcggtgacactgccctcagtcccgacg
ggaaccgggaacatggccgtcggggacatgagctcactgttgagcgccctggctgaggag
aacaagttcctcaacctgattagctaa
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integrated database retrieval system
