Xiphophorus maculatus (southern platyfish): 102237475
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Entry
102237475 CDS
T02923
Symbol
bdnf
Name
(RefSeq) brain-derived neurotrophic factor isoform X2
KO
K04355
brain-derived neurotrophic factor
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102237475 (bdnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xma04052
]
102237475 (bdnf)
Cytokines and neuropeptides [BR:
xma04052
]
Cytokines
Growth factors (RTK binding)
102237475 (bdnf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NGF
Spaetzle
NTF3_N
Motif
Other DBs
NCBI-GeneID:
102237475
NCBI-ProteinID:
XP_005812591
Ensembl:
ENSXMAG00000019981
LinkDB
All DBs
Position
4:20296246..20310548
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AA seq
269 aa
AA seq
DB search
MTILFLTMVISYFSCMRAAPLRDAPGMRGHWTEGYLGAAATAPRGHGTPQSGGGPGQREE
LPSLTDTFEQVIEELLEVEGEAVQLGQGADKSQGGGGPSPVATAEANDVDLYNSRVMISN
QVPLEPPLLFLLEEYKNYLDAANMSMRVRRHSDPSRRGELSVCDSISQWVTAVDKKTAID
MSGQTVTVMEKVPVPNGQLKQYFYETKCNPMGYTKDGCRGIDKRHYTSQCRTTQSYVRAL
TMDSKKKIGWRFIRIDTSCVCTLTIKRGR
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcctgttccttactatggttatttcatacttcagttgcatgagagctgcgccc
ctgagagacgccccgggcatgcggggccattggacggaaggctacctgggcgctgctgcg
acggccccccgaggccatgggactccacagagtggcggcgggccgggccagcgcgaggag
ctcccctcgctcacagacacattcgagcaggtgatagaggagctgctggaagtggagggt
gaggcggtgcagctgggacagggggccgacaagagtcagggaggtgggggcccgtcgccc
gtggccaccgcagaggccaatgatgtcgatctgtacaactcgcgggtgatgatcagcaac
caagtgcctttggagccgccgttgctctttctcctggaggaatacaaaaactatctggat
gctgcgaacatgtccatgagggtgcggcggcactccgacccctcgcggcgtggagagctc
agtgtgtgtgacagtattagccagtgggtgacagctgtggataaaaagacggcgatagac
atgtctgggcagacagtaaccgtcatggagaaggtccctgtccccaatggccaactgaag
caatacttttatgagaccaaatgcaaccccatggggtacacaaaggacggctgcagagga
atagacaagcggcattatacatcccaatgcaggacaacccagtcctacgtgcgagcgctc
accatggatagcaaaaagaagattggctggcggtttataaggatagacacttcatgtgta
tgcacattgaccattaaaagagggagatag
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