Xiphophorus maculatus (southern platyfish): 102238041
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Entry
102238041 CDS
T02923
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
xma
Xiphophorus maculatus (southern platyfish)
Pathway
xma04010
MAPK signaling pathway
xma04260
Cardiac muscle contraction
xma04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102238041
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
102238041
04261 Adrenergic signaling in cardiomyocytes
102238041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xma04040
]
102238041
Ion channels [BR:
xma04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102238041
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
DUF2201
VWA_CoxE
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
102238041
NCBI-ProteinID:
XP_023180401
Ensembl:
ENSXMAG00000004343
LinkDB
All DBs
Position
2:12019154..12089180
Genome browser
AA seq
1095 aa
AA seq
DB search
MDTCRVRTWLFLLLLWQEGCLPSQFPTQLMIKEWVDQMQKELVTLADTATAGQSLTQIFL
KNQHLYTVEQNDAEELVARAARNIEQLLRKRSAALEKLATAAEVFQKEHAWKDEFEDDEI
AYYNSKDNLDANETEGRKYRIRPDFKEDPSFKRLTDHNHTAVHIPTDIYDGSTIVLNELN
WTEALEDVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKNTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLYSTNVSRANCNKIIMLFTDG
GEERAQSILEKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALELGLVITGTLPVFNRTKTVDDRNGEHQNQL
ILGVMAIDVSLDDIKKVTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFL
DAELENDIKVEIRRMMIDGEIGESTIDTLVKTQDERYIDRGVRTYTWAPVNGTDYSLALV
LPKYSENFIQAKLGDDIKQAISSPWGEEAMETIQLDRFDEFGYTYIAPREYCKEVKVSLN
NTQFLLDFNQYIDRSTADACNESLVKRLILDAGLTAELVKVWKEQSVDGTVARFVATDGG
ITRVYPRSAGEEWTENPETYDSSFYKRTLDNEIYIFTAPSFNTEVREPVSESGILVSKAI
DLIIDKVMLKPAVVGVKLNVSFWMNSFINATLKLNCKDEICGCLRNDKHVDCVILDDGGF
LLMSNQEEYISLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSVCDPEKDNKAAAGPRS
IFVPTIADVLSIGWWASNAAWSMLQQLFFSLLFPNLLEAVESADDDIPDAMFKESCITEQ
TQYFFDNDERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDPRPLRQAEQP
SEGPNPCELAQSPRYRKGPDVCFDNNENDEPLCPVSRGSTLTSTPLLLFLCLTSGSVSSQ
SFIEDSLANQVKKIP
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggatacctgcagggtacgaacctggctgttcctgctcctgctgtggcaggagggctgt
ttgccatcccagttccccacacagctcatgattaaggaatgggttgatcaaatgcagaaa
gagctcgtcaccttggcagacacagccacagcagggcagagcctcactcagatttttctg
aaaaatcagcatctctatactgtagagcaaaatgacgcagaagagctggtggccagagca
gccaggaacatagaacagctgctgcggaagaggtctgctgccttggagaaactggccaca
gctgcagaggtattccagaaggaacatgcatggaaagacgagtttgaggatgatgaaatt
gcttactacaattcaaaggacaacctggatgcaaatgagacagaggggagaaaatacagg
attcgaccagactttaaagaggacccttcattcaaacggttgactgatcacaaccataca
gctgtccacattcccactgacatctatgatggctctaccatcgtgctgaatgagctgaac
tggacagaggcactggaggatgtctttaaaaagaacagagaagatgacccaacacttctt
tggcaggtgtttggcagtgctacaggcctggctcgctactacccagcctctccgtggatg
gatgctcgcaaaactcccagcaaaattgatctgtatgatgtccgcaggaggccatggtac
attcaaggggctgcctcacccaaagatatgctaatccttgtggatgcgagtggtagtgtc
tcaggtctgactctgaaactaatcagaacatccgtcagtgagatgctagagacattgtct
gatgatgattacgtcaatgttgtttattttaacactagagtgaagaacacagcctgcttc
gaccatctggttcaggccaacgtgaggaacaagaagctgctgaaagatgctgtgcagaac
atcacagccaaaggaattacaaattacactaaaggctttgagtttgcatttgaacagctt
tattcgactaatgtgagtagagcaaactgcaacaagatcatcatgttgtttactgatgga
ggagaggaacgagctcagtccatactggaaaaatataatgcagacaaaaaggtcagaatc
ttcaccttttcagttggacaacacaactatgataaaggacccatccagtggatggcctgc
tccaacaaaggttacttttatgagattccttccattggagccatcaggataaacacacag
gaatatctagatgtcttgggaaggcccatggttctagcagacaaacaggccaaacaagtc
cagtggactaatgtctatcttgatgctctggaactaggtctggtcattactggaacactg
cctgttttcaacagaacaaagactgttgatgacaggaacggagagcatcaaaatcagttg
attttgggcgtaatggcgattgatgtatctcttgacgacatcaagaaagtcacaccacgc
ttcacaattggtcctaatggatactactttgctattgatcccaacggatatgttctgctg
catcccaatctccagccaaagaatcctaaatttcaggagcctgtgaccttggactttctt
gatgctgagttggaaaatgacataaaagtggagataagaagaatgatgattgatggagaa
ataggagaaagtactattgatactttggttaaaactcaagatgagagatatatagacaga
ggggtaagaacctacacatgggctccagtcaatggaacagattacagcctggcccttgtt
ttacctaaatacagtgaaaacttcattcaagctaaacttggggacgacataaaacaagcc
atctcttcaccttggggggaagaagccatggaaactattcagctggataggtttgacgag
tttggttatacttacattgctccaagggaatactgcaaagaggtgaaggtatctctcaac
aacacccagtttcttctcgacttcaaccagtacattgacagaagtactgcagatgcatgc
aatgagtctctcgtgaaacgactcatcctggatgcaggcctgacagctgagctggttaaa
gtttggaaagagcagtcagtagatggaacagtagcaaggtttgtcgcaacagatggagga
attactagagtttatccgagaagtgctggagaagaatggacagagaatcctgagacatat
gattccagcttctacaagaggactttggataatgaaatatatatattcacagctccatct
tttaacacagaggtcagggagcctgtgtccgaatcgggaatcctggtgagcaaagcaata
gacctcatcatcgataaagtcatgctcaaaccagcagtggtgggagtaaaactcaatgtt
tcattctggatgaacagttttatcaatgcaacactgaaacttaattgcaaagatgagatt
tgtggctgtcttaggaatgataagcatgtggattgtgtaatattggatgatggaggattt
ctgctcatgtctaatcaagaagagtatatttccttgataggtcagttctttggcgaggtt
gatccggtgctgatgataaacttggtcaacacatccctgtactccttcaacaagacatat
gactatcagtctgtgtgtgacccagagaaggacaacaaggcagcagcaggacctcgctcc
atatttgtgcctactattgcagacgtcctcagtataggctggtgggcttccaatgctgct
tggtcaatgcttcaacagcttttcttcagtcttttgttccctaaccttttagaagcagtg
gagtcagcagatgatgacataccagatgccatgttcaaagaaagctgcatcacagagcag
actcagtacttttttgacaatgatgaaagatcatactcgggtgtcctagactgtggaaac
tgctccaggatgtatcgtgctgagaagcttcccaacacaaacctggtgtttctgatcact
gatgccaaggcaacatgtttatcatgtgatcccaggccacttcgtcaggctgagcaaccc
tctgaaggaccaaatccttgtgagctggctcagagccccagataccgcaaagggcctgat
gtatgctttgacaacaatgaaaatgatgagccactgtgtccagtcagtcggggttccact
ctcacctctacacctcttcttttgtttctgtgtctgacttcagggtcagtttcatcacaa
agctttattgaggacagtttagccaatcaagttaaaaaaattccatag
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