Xanthomonas medicagonis: AB3X07_08145
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Entry
AB3X07_08145 CDS
T10867
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xmd Xanthomonas medicagonis
Pathway
xmd01501
beta-Lactam resistance
xmd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3X07_08145
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3X07_08145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xmd02000
]
AB3X07_08145
01504 Antimicrobial resistance genes [BR:
xmd01504
]
AB3X07_08145
Transporters [BR:
xmd02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
AB3X07_08145
Antimicrobial resistance genes [BR:
xmd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3X07_08145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XEB11113
LinkDB
All DBs
Position
1917310..1920459
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLAGLLSVLTLPIAQYPSIAPPAVAITANYPGASAKTLEDT
VTQVIEQKMKGLDHLSYMASTSESSGQVTITLTFDNGTDPDTAQVQVQNKLSLATPLLPQ
EVQQQGVTVTKSATNFLNVLAFTSEDGSMSASDLSDYVAANVQETISRVEGVGDTTLFGS
QYAMRLWLDPNKLSNFGLTPLDVKTAVQAQNAQVSAGQLGALPAAANQQLNATITAQTRL
KTAAEFEDILLRTQPDGAQVRLRDVARIELGSESYNSAGRYNGKPAAGLAIKLATGANAL
DTVKAIDASMAEQEKFFPPGMKVQKPYDTTPFVRISIEEVVRTLVEAVVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFGVLAVFGFTINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEQLPPKEATRKSMGQITGALVGVALVLAAVFVPMAFFGGSTGVIYRQFSITIVAAMTL
SVLVAMVLTPALCATLLKPAKQHGMATTGFFGWFNRVFDRGNGRYQGIVRHMLGKGWRYM
IGYAVVLALVVFGFMKLPVGFLPDEDQGTLFVLIQLPPGATAVRTDAVIRQVEQHFLVDQ
KDSVSGVFAVNGFSFAGSGQNLGLAFVKLRPWDERTGKDQSVTAVAAKAGKVFAGIRDAR
VFAFAPPAVSELGNATGFDLMLQDRANLGHDALMQARNQLLAELSKDQRLVAVRPNGQED
TPEFKLDIDAHKAETLGLSISDINATFSSAWGSSYVNDFIDKGRVKKVMLQAEAPYRMLP
EDIDRWYVRNGAGEMVAFSSFATAGWTMGSPRLERYNSLPSVEILGMAKPGAASSGQALA
IVEAAAAKLPPGIGYEWTGLSRQEKASSGQTGLLYGLSILIVFLCLAALYESWSIPFAVI
LVVPLGVIGALLGAVLTWKMNDVYFQVGLLTTIGLACKNAILIVEFAKELHEGGKSLVEA
ALEAARMRLRPILMTSLAFILGVVPLVLGSGAGAGAQHALGTAVIGGMLSGTVLAIFFVP
LFFVLVCGLLKRRTGSAPDPSATPAAGGA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcttcttcatcgaccgcccgatcttcgcctgggtgctggccatcatcgtgatg
ctggccggtctgctgtccgtcctcaccctgcccatcgcgcaatacccgagcatcgcgccg
cccgcggtggcgatcaccgccaactatcccggcgcctcggccaagaccctcgaggacacc
gtcacccaggtcatcgagcagaagatgaagggcctggaccacctgagctacatggcctcc
accagcgagtccagcggccaggtcaccatcaccctgaccttcgacaacggcaccgacccg
gacaccgcgcaggtgcaggtgcagaacaagctgtcgctggccacgccgttgctgccgcag
gaagtgcagcagcagggcgtcaccgtgaccaagtcggcgaccaacttcctcaacgtgctg
gccttcacctccgaggacggcagcatgagcgcgtcggacctgtccgactacgtcgccgcc
aatgtgcaggaaacgatcagccgcgtcgaaggcgtcggcgacaccaccttgttcggctcg
cagtacgcgatgcgcctctggctggaccccaacaagctcagcaacttcggcctgaccccg
ctggacgtgaagaccgcggtgcaggcgcagaacgcgcaggtctcggccggccagctcggc
gccttgccggcggcagccaaccagcagctcaacgccaccatcaccgcgcagacgcggctg
aagaccgccgccgagttcgaggacatcctgctgcgcacgcagcccgacggtgcgcaggtg
cggttgcgcgacgtggcccggatcgaactgggcagcgagagctacaacagcgccggccgc
tacaacggcaagcccgccgccggcctggcgatcaagctggccaccggcgccaacgcgctg
gacacggtcaaggcgatcgatgccagcatggccgagcaggagaagttcttcccgccgggc
atgaaggtgcagaagccgtacgacaccacgccgttcgtgcgcatctcgatcgaggaggtg
gtgcgcaccctggtggaggcggtggtgctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccacgctgattccgaccatcgccgtgccggtggtgctgctgggcaccttc
ggcgtgctggcggtgttcggcttcaccatcaacacgctgaccatgttcgcgatggtgctg
gcgatcggcctgctggtggacgatgccatcgtggtggtggagaacgtcgagcgggtgatg
agcgaggagcagttgccgccgaaggaagccacgcgcaagtcgatggggcagatcaccggc
gcgctggtcggcgtggccctggtgctggccgcagtgttcgtgccgatggcgttcttcggc
ggttccaccggcgtcatctatcgccagttctcgatcaccatcgtcgcagcgatgacgctg
tcggtgctggtggcgatggtgctgaccccggcgctgtgcgcgaccttgctcaagccggcc
aagcagcacggcatggccaccaccggcttcttcggctggttcaaccgcgtgttcgaccgc
ggcaacggccgctaccagggcatcgttcggcacatgctgggcaagggttggcgctacatg
atcggctatgcggtggtgctggcgctggtggtgttcggcttcatgaaactgccggtcggg
ttcctgcccgacgaagaccagggcacgctgttcgtgctgatccagttgccgcccggcgcc
accgcggtgcgcaccgatgcggtgatccgccaggtcgagcagcacttcctggtcgaccag
aaggattcggtctccggcgtgttcgccgtcaatggcttcagtttcgccggcagcgggcag
aacctgggtctggccttcgtcaagctgcggccgtgggacgagcgcaccggcaaggaccag
agcgtgaccgcggtggccgccaaggccggcaaggtcttcgccggcatccgcgacgccagg
gtgttcgcgttcgcgccgccggcggtgtcggaactgggcaatgccaccggcttcgacctg
atgctgcaggatcgcgccaacctcggccacgacgcgctgatgcaggcgcgcaaccagttg
ctggccgaactgtccaaggaccagcggctggtcgcggtgcgcccgaacgggcaggaggac
acgccggagttcaagctggacatcgacgcgcacaaggccgagacgctgggcctgtcgatc
tccgacatcaacgccacgttctccagcgcctggggcagcagctacgtcaacgacttcatc
gacaagggccgggtcaagaaggtgatgctgcaggccgaagcgccgtaccgcatgctgccg
gaggacatcgaccgctggtacgtgcgcaacggcgccggcgagatggtcgcgttcagttcc
ttcgccacggccggctggaccatgggctcgccgcgcctggagcggtacaacagcctgccg
tcggtggagatcttgggcatggccaagccgggcgcggcctccagcgggcaggccctggcc
atcgtcgaggccgccgcggccaagctgccgccgggcatcggctacgaatggaccgggttg
tcgcggcaggagaaggcgtccagcggccagaccggcctgctgtacggactgtcgatcctg
atcgtgttcctgtgcctggcggcgctgtacgaaagctggtcgatcccgttcgcggtgatc
ctggtggtgccgctgggcgtgatcggcgcgctgctcggcgcggtgctcacctggaagatg
aacgatgtctacttccaggtgggcctgctgaccaccatcggcctggcctgcaagaacgcg
atcctgatcgtggagttcgccaaggaactgcacgagggcggcaagagcctggtcgaggcg
gcactggaagcggcgcgcatgcgcctgcggccgatcctgatgacctcgctggcgttcatc
ctcggcgtggtgccgctggtgctgggcagcggcgccggcgccggcgcgcagcacgcgctg
ggcaccgcggtgatcggcggcatgctgtcgggcacggtgctggcgatcttcttcgtgccg
ctattcttcgtgctggtgtgcggcctgttgaagcgccgcaccgggtccgctccggatccg
tccgccacgcctgccgcgggaggcgcctga
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