Xanthomonas medicagonis: AB3X07_08895
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Entry
AB3X07_08895 CDS
T10867
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB3X07_08895 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xmd03400
]
AB3X07_08895 (nth)
Enzymes [BR:
xmd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AB3X07_08895 (nth)
DNA repair and recombination proteins [BR:
xmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AB3X07_08895 (nth)
Prokaryotic type
AB3X07_08895 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
HHH_8
DprA_N
Motif
Other DBs
NCBI-ProteinID:
XEB11252
LinkDB
All DBs
Position
complement(2090542..2091216)
Genome browser
AA seq
224 aa
AA seq
DB search
MSARATAPRRGPTLSKAEIHELFARLSELNPHPTTELEYSTPFELLIAVILSAQATDVGV
NKATRRLYPVANTPAAILALGEDRLKRYISTIGLFNAKAKNVIATCRILVEQHGSEVPRA
REALEALPGVGRKTANVVLNTAFGEPTMAVDTHIFRVANRTGLAPGKDVRAVEDALLRRV
PAQFLHDAHHWLILHGRYVCKARKPDCPQCAIRDLCRYKDKTPG
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcgcgccacggcgccgcgacgcggccccacgctgagcaaggccgagatccac
gaactgttcgcgcgcctgtccgaactcaatccgcatccgaccaccgagctcgaatacagc
accccgttcgaactgctgatcgcggtgatcctgtcggcgcaggccaccgacgtcggggtc
aacaaggcgacccgccgtctgtacccggtggcgaacacgccggcggcgatcctggcgctg
ggcgaggaccggctgaagcgctacatctccaccatcggcctgttcaacgccaaggccaag
aacgtcatcgccacctgccgcatcctggtcgaacagcacggcagcgaggtgccgcgtgcg
cgcgaagcgctggaggcgctgcccggggtcggccgcaagaccgccaacgtggtgctcaac
accgccttcggcgagccgaccatggcggtggacacgcacatcttccgtgtcgccaaccgg
accgggctggcgcctggcaaggacgtgcgcgcggtcgaggacgccttgctcaggcgcgtg
cccgcgcagttcctgcacgacgcgcaccactggctgatcctgcacggccgctacgtgtgc
aaggcacgcaagcccgactgcccgcagtgcgcgatccgcgacctgtgccggtacaaggac
aagacaccaggctga
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