Xanthomonas medicagonis: AB3X07_09405
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Entry
AB3X07_09405 CDS
T10867
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00020
Citrate cycle (TCA cycle)
xmd00785
Lipoic acid metabolism
xmd01100
Metabolic pathways
xmd01110
Biosynthesis of secondary metabolites
xmd01120
Microbial metabolism in diverse environments
xmd01200
Carbon metabolism
xmd01210
2-Oxocarboxylic acid metabolism
Module
xmd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xmd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AB3X07_09405
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
AB3X07_09405
Enzymes [BR:
xmd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
AB3X07_09405
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
XEB11350
LinkDB
All DBs
Position
complement(2202642..2205467)
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AA seq
941 aa
AA seq
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MDNLLKQFAQSSQLAGGNAAYIEDLYEQYLVSPDSIDPKWKTYFDGFQGRDAGDVPHSAV
IAHIASAARQAANSGTGPSGDERERHVGRLITAYRSRGHLGARLDPLGLTPPVNPPDLGL
PFHSLSESDLGSEFSTGGLGGQPRMKLRDLLARLKATYTGSIGSEFMHISEFEQRQWIYQ
RLENAGGNIAGDAASRRRTLERITAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDVLVQ
RAGHDAVKDIVVGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHAHDDRAHTGDVKYHMG
FSADVAVADGKSVHLALAFNPSHLEIVDPVVVGSVRSRQERYGDAARTSVLPVIIHGDAA
FAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTSARDDARSTLYCTDVAKMIGAPV
FHVNGDDPDAVAFVANLAYDFRQQFNKDVVIDLVCYRRWGHNEADEPAATQPVMYQTIRK
HKTTRELYAAQLESEGVLQAGEAQALVDGYRNKLDSGEYTTELATRKPDEFAIDWSKYLS
GKLTDKVDTTVKRKTLDQLAKLITTIPGGVELHPRVAKIYEDRVKMAAGELPGDWGFAEN
LAYATLLGEGHKLRLVGQDAGRGTFFHRHAILHDQKTDSYYLPLRQLVENPEDATVIDSL
LSEEAVMGFEYGYSTTDPNALCIWEAQFGDFANGAQVVIDQFIAAGEAKWGRITGLALFL
PHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQAFHMIRRQMRMSTRKPLVVMTP
KSLLRHKLAVSTLEELADGEFQHLIPDAKADPKQVKRVVACSGKVYYDLLEDQTKRGQDD
VAILRVEQLYPFPRELLSAELKRYSNATDLVWCQEEPQNQGAWYQIKHHLQACLADGQSL
HYAGRARSPSPAAGHFAEHVEEQVKLVADALLNPFNDQVAE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctactcaagcagtttgcgcagtcatcgcaactcgccggcggcaatgccgcc
tatatcgaagacctgtacgaacagtatctggtctctcccgacagcatcgatcccaagtgg
aaaacctacttcgacggcttccagggccgcgatgccggtgacgttccccactctgcggtc
atcgcccacatcgccagcgccgcgcgccaggccgccaacagcggcaccggcccgagcggc
gacgagcgcgagcgccacgtcggccgcctgatcaccgcctaccggtcgcgcggccacctc
ggcgcgcgcctggatccgctgggtctgacccccccggtgaacccgccggacctgggcctg
ccgttccacagcctgtcggaaagcgatctgggcagcgagttcagcaccggcggcctcggc
ggccagccgcggatgaaactgcgcgacctgctggcgcggctgaaggcgacctacaccggg
tcgatcggcagcgagttcatgcacatctccgagttcgaacagcgccagtggatctaccag
cgcctggagaacgcgggcggcaacatcgccggcgacgccgccagccgccgccgcaccctg
gagcggatcaccgccgccgagggcctggagcgctacctgcacaccaagtacgtcggccag
aagcgcttctcgctggaaggcggcgattcgctgatcccgatgatggacgtgctggtgcag
cgcgccggccacgacgcggtcaaggacatcgtggtcggcatggcccaccgcggccgcctc
aacgtgctggtcaacaccctgggcaagaacccgcgcaagctgttcgacgagttcgaaggc
aagttcgagcacgcccacgacgaccgcgcccacaccggcgacgtgaagtaccacatgggc
ttctccgccgacgtggcggtggccgacggcaagtcggtgcatctggcgctggcgttcaac
ccctcgcacctggaaatcgtcgaccccgtcgtggtcggcagcgtgcgttcgcgccaggag
cgctacggcgacgccgcgcgcacctcggtgctgccggtgatcatccacggcgatgccgcg
ttcgccggccagggcgtggtcatggagctgttccagatgtcgcaggcgcgcggcttcgcg
gtcggcggcaccgtgcacatcgtggtcaacaaccagatcggcttcaccaccagcgcccgc
gacgacgcccgttccacgctgtactgcaccgacgtcgccaagatgatcggcgcgccggtg
ttccatgtgaatggcgacgatccggacgcggtggcgttcgtggccaacctggcctacgac
ttccgccagcagttcaacaaggacgtggtcatcgacctggtctgctaccgccgctggggc
cacaacgaggccgacgagccggcggccacccagccggtgatgtaccagaccatccgcaag
cacaagaccacccgcgagctgtacgccgcccagttggaaagcgagggcgtgctgcaggcc
ggcgaggcgcaggcgctggtcgacggctaccgcaacaagctggactcgggcgagtacacc
accgagctggcgacccgcaagccggacgaattcgccatcgactggtccaagtacctgtcg
ggcaagctgaccgacaaggtcgacaccacggtcaagcgcaagaccctggaccagctggcc
aagctcatcaccaccatcccgggcggcgtcgagctgcacccgcgcgtggccaagatctac
gaggatcgcgtgaagatggccgccggcgaactgccgggcgactggggcttcgccgagaac
ctggcctacgccaccctgctcggcgaaggccacaagctgcgcctggtcggccaggacgcg
ggccgcggcacgttcttccaccgccacgcgatcctgcacgaccagaagaccgacagctac
tacctgccgctgcgccagctggtggagaacccggaagacgccaccgtgatcgactcgctg
ctcagcgaggaagcggtgatgggcttcgagtacggctactccaccaccgaccccaatgcg
ctgtgcatctgggaagcgcagttcggcgacttcgccaacggcgcgcaggtggtgatcgac
cagttcatcgccgccggcgaggccaagtggggccgaatcaccggcctggcgctgttcctg
ccgcacggctacgaaggccagggtccggagcacagctccgcgcgcctggagcgcttcctg
cagctgtgcgcgctggagaacatgctggtctgcgtgccgaccaccccggcccaggcgttt
cacatgatccgccggcagatgcgcatgtccacgcgcaagccgctggtggtgatgacgccc
aagtctctgctgcgccacaagctggcggtgtcgaccctggaagaactggccgatggcgag
ttccagcatctgatcccggatgccaaggccgacccgaagcaggtcaagcgcgtggtcgcc
tgctcgggcaaggtctactacgacctgctcgaggaccagaccaagcgcggccaggacgac
gtcgccatcctgcgcgtggagcagctgtacccgttcccgcgcgagctgctgtcggccgaa
ctcaagcgctacagcaacgccaccgacctggtctggtgccaggaagagccgcagaaccag
ggcgcctggtaccagatcaagcaccacctgcaggcctgcctggccgacgggcaaagcctg
cactacgccggccgcgcgcgttcgccgtcccccgccgccggccatttcgccgagcacgtg
gaggagcaggtgaagctggtcgccgatgcgctattgaatccgttcaacgaccaggtcgct
gaataa
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