Xanthomonas medicagonis: AB3X07_09985
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Entry
AB3X07_09985 CDS
T10867
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xmd Xanthomonas medicagonis
Pathway
xmd01501
beta-Lactam resistance
xmd01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB3X07_09985
01503 Cationic antimicrobial peptide (CAMP) resistance
AB3X07_09985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xmd03036
]
AB3X07_09985
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xmd02000
]
AB3X07_09985
01504 Antimicrobial resistance genes [BR:
xmd01504
]
AB3X07_09985
Chromosome and associated proteins [BR:
xmd03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
AB3X07_09985
Transporters [BR:
xmd02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
AB3X07_09985
Antimicrobial resistance genes [BR:
xmd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB3X07_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
Beta-barrel_RND_2
BSH_CzcB
BSH_RND
RND-MFP_C
BSH_CusB
CzcB_C
Beta-barrel_RND
Biotin_lipoyl
Beta-barrel_YknX
HH_MFP_RND
BSH_YknX
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
XEB11460
LinkDB
All DBs
Position
2340435..2341559
Genome browser
AA seq
374 aa
AA seq
DB search
MTRSSMRRTASCAAALMLTSTLLLGGCKPATDAQAQQKEGDKAPDAVPVEVVQATRRAVA
ASYSGTAALEARAESQVVAKTSGVALAVLAEEGQQVRAGQPLVRLDPDRARLAVAQSEAQ
LRKLENNYRRSQQLVGQQLVSAADVDQIKYDLANVRAQHQLASLELSYATVVAPISGVIA
SRSIKTGNFVQINTPIFRIVDDSRLEATLNVPERELATLKAGQPVTLLADALPGKQYQGK
VDRIAPVVDSGSGTFRVVCAFEEGAEALQPGMFGRIRIDYDQRADALVVPRAALLDDGDP
AVFKVVAGKAKRVPVTLGYAEGPWVEIRAGLQPGDQVVTAGKVALRDGSSVQVIAPQRAA
ASAGAGGGAAVGAR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgatcttccatgcgccgcaccgccagctgcgccgccgcgctgatgctcacttcc
acactgctgctcggcggctgcaagccggcgaccgacgcgcaggcgcaacagaaggagggc
gataaggcgccggacgcggttccggtggaggtggtccaggcgacccggcgcgcggtggcg
gccagctacagcggtaccgcggcgctggaagcgcgcgccgaatcgcaggtggtggccaag
acctcgggcgtggccctggcggtgctggccgaggaaggccagcaggtccgcgccggacag
ccgctggtgcggctggacccggaccgggcgcggctggcggtggcgcagagcgaggcgcag
ctgcgcaagctggagaacaactaccggcgctcgcagcagctggtcggccagcaactggtc
agcgccgccgacgtcgaccagatcaagtacgacctggccaacgtgcgcgcgcagcaccaa
ttggcgtcgctggaactgtcctacgccacggtggtggcgccgatctccggagtaatcgcg
tcgcgttcgatcaagaccggcaacttcgtgcagatcaatacgccgatcttccgcatcgtc
gacgactcgcgcctggaggccacactcaacgtgcccgaacgcgagctggccacgctcaag
gccgggcaaccggtgacgctgctggccgacgcgctgccgggcaagcagtaccagggcaag
gtcgaccgcatcgcgccggtggtggattcgggcagcggcacgttccgcgtggtgtgcgcc
ttcgaggaaggcgccgaggcgttgcagccgggcatgttcgggcgcatccgcatcgactac
gaccagcgcgccgacgccttggtggtgccgcgcgcggcgctgctcgacgacggcgatccg
gccgtgttcaaggtggtcgccggcaaggcgaagcgggtgccggtgacgctgggttacgcc
gaaggcccgtgggtggagatccgcgccggcctgcagcctggcgaccaggtggtgaccgcc
ggcaaggtcgcgttgcgcgacggcagcagcgtgcaggtgatcgcgccgcagcgcgccgcc
gccagcgccggcgcgggcggcggcgccgcggtcggagcgcgctga
DBGET
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