Xanthomonas medicagonis: AB3X07_18780
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Entry
AB3X07_18780 CDS
T10867
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xmd Xanthomonas medicagonis
Pathway
xmd00300
Lysine biosynthesis
xmd00550
Peptidoglycan biosynthesis
xmd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xmd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB3X07_18780
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB3X07_18780
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
AB3X07_18780
Enzymes [BR:
xmd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
AB3X07_18780
Peptidoglycan biosynthesis and degradation proteins [BR:
xmd01011
]
Precursor biosynthesis
Amino acid ligase
AB3X07_18780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
XEB08834
LinkDB
All DBs
Position
complement(4434057..4435553)
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AA seq
498 aa
AA seq
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MSRVLPLSQLLPGVALARDVQVSGLVMDSRAVRPGDAFVAIAGFGAHGLGFVEQARANGA
AAILFEPPAPAELPAPADAIAVPGLRARMGAMADQFHGHPSQTMTMVGVTGTNGKTSTVQ
LLAQAWQRLGTRSGSIGTLGVGLYGDVVPTGFTTPLVLQTHALLAQLRDAGAQAVAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGDMARYGAAKARLFATPGLKSAVVNLDDAF
GRALLETLDPALRRIGVSSRGQAGATVRAEGLRLDARGIGFDLLIGEARHPVQSALLGRF
NVDNLLAVAGALHALDVAPVRIAATLSQLQPIRGRMNRLGGHDAQPLLVVDYAHTPDALE
QALGSLRGHAHGRLLCVFGCGGERDTGKRPQMAAIAQRLADAVIVTDDNPRGEDGDRIVA
DILAGFTDPHAVRVQRDRAQAIAQAVAEAGADDIVLIAGKGHEPYQEIAGIKHPFDDTEV
AAQALQARVQVQAGEGVR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgtgctgccgctgtcgcaactgctgccgggcgtggcgctggcgcgcgatgtg
caggtgtccgggctggtcatggacagccgcgcggtgcgcccgggcgatgccttcgtggcg
atcgccgggttcggcgcgcacgggctgggcttcgtcgaacaggcgcgcgccaacggcgcc
gcggcgatcctgttcgagccgccggcgccggccgagctgccggccccggccgatgcgatc
gcggtgccgggcctgcgcgcgcgcatgggcgcgatggccgaccagttccacggccatccg
tcgcagaccatgaccatggtcggggtcaccggcaccaacggcaagacctccaccgtgcag
ttgctggcgcaggcctggcagcgcctgggcacgcgcagcggcagcatcggcacgctcggc
gtgggcctatacggcgacgtggtgccgaccggcttcaccaccccgctggtgctgcagacg
catgcgctgctggcgcagttgcgcgacgccggcgcgcaggcggtggcaatggaggtcagt
tcccacgcgctcgaccagggccgcgtggacgcggtgcatttcgacgtggcggtgttcacc
aacctcacccgcgatcacctggactaccacggcgacatggcccgctatggcgcggccaag
gcgcgcctgttcgccacgccggggttgaagtcggcggtggtcaacctggacgacgcgttc
ggccgtgcattgctggagacgctggacccggcgctgcgccgcatcggcgtcagctcgcgc
ggccaggccggcgccacggtgcgtgccgagggcctgcgcctggatgcgcgcggcatcggc
ttcgacctgctgatcggcgaggcgcgccacccggtgcagtcggcgttgctcggtcgcttc
aacgtggacaacctgctggccgtggccggcgcgctgcatgcgctggacgtggcaccggtg
cgcatcgccgccacgctgtcgcagctgcaaccgatccgcgggcgcatgaaccgcctcggc
gggcacgacgcgcagccgttgctggtggtcgattacgcgcacaccccggacgcgctggag
caggcgctgggcagcctgcgcggccacgcgcatggccgcctgctgtgcgtgttcggctgc
ggcggcgagcgcgataccggcaagcgcccgcagatggcggcgatcgcgcagcgcctggcc
gacgcggtgatcgtcaccgacgacaatccgcgcggcgaggacggcgaccgcatcgtcgcc
gacatcctggccggcttcaccgacccgcacgcggtgcgcgtgcagcgcgaccgcgcacag
gccatcgcccaggccgtggccgaggccggtgccgacgacatcgtgctgatcgccggcaag
ggccacgagccctaccaggagatcgccggcatcaagcatccgttcgacgataccgaggtc
gccgcgcaggcgttgcaggcgcgcgtccaggtccaggccggggagggcgtgcgatga
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