Xenorhabdus nematophila AN6/1: XNC2_1491
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Entry
XNC2_1491 CDS
T03752
Symbol
ybjF
Name
(GenBank) putative tRNA (uracil-5-)-methyltransferase with S-adenosyl-L-methionine-dependent methyltransferase domain
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
xnm
Xenorhabdus nematophila AN6/1
Brite
KEGG Orthology (KO) [BR:
xnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xnm03009
]
XNC2_1491 (ybjF)
Enzymes [BR:
xnm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
XNC2_1491 (ybjF)
Ribosome biogenesis [BR:
xnm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XNC2_1491 (ybjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
CEK22485
LinkDB
All DBs
Position
I:1412964..1414091
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AA seq
375 aa
AA seq
DB search
MQCVQYTAGHCHSCQWLDKSYSHQLSDKQKHLKQLLQETSVTHWLSPVMSKTSGFRNKAK
MVVNGSVERPLLGMLHRDGRTVDLCDCPLYPQHFQAVFEVIKVFIAKAGLVPYNVERRKG
ELKYILLTESRANNEMMLRFVLRSETKLAQLERVLPWLQEQLPQLTVISANIQPTHMAIL
EGEKEIIFTGQTMLKETFNGIPLYIRPRSFFQTNPDIASELYATAGRWVRELNISSMWDL
FCGAGGFGLHCADKETKLTGIEISAEAIDCAKSSAKSLGLKSVEFQALDSTHFALEKAKI
PELVLVNPPRRGIGKELCEYLSRMAPKFVLYSSCNAETMAKDIAMLKQYRIEKVQLFDMF
PHTEHYETLALLILD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgtgcagtatactgcggggcattgtcactcctgccagtggctcgataagtcc
tattcacatcaattatctgataaacaaaaacatttaaaacaacttttacaggaaacatca
gtaacacactggttatcaccagtaatgagcaagacgagcggatttcgtaataaagccaag
atggttgtgaatggcagtgttgagcgtcctctactcggtatgctgcatcgtgatggtaga
acggtagatctttgtgattgtccgttgtatccacaacacttccaggcagtttttgaagta
ataaaagtgtttattgctaaagctggtttggttccgtacaacgtagaacgtaggaagggg
gaactgaagtatattcttctgacagaaagtcgtgccaacaacgaaatgatgttgcggttc
gttttgcgttcagaaacaaaattagctcagttagagcgggtactgccgtggttgcaggaa
caattaccgcaattgacagtgatttccgctaatatccagccgactcatatggcaatactg
gaaggtgaaaaagaaattattttcactggccagacaatgttaaaggaaacttttaacggt
atcccattgtatattcgtccgcgtagttttttccagactaacccagatatagcctcagaa
ctgtatgcaacagcggggcgttgggttagagaattgaatatcagcagcatgtgggatctg
ttttgtggtgcgggtggctttggtctgcattgtgcggataaagagactaagttaacgggg
attgagattagtgcagaggctattgattgcgctaaaagttcagccaaaagtctggggctg
aaatcagtggagtttcaggcgttggattctactcattttgcccttgagaaagcaaaaata
ccagagttggtattggttaatcctccccgcagaggtattggtaaagaactttgtgaatat
cttagccggatggcacctaagtttgtgctttattcaagttgtaacgctgaaacgatggca
aaagatattgctatgctcaagcaatatcgaatagaaaaagtgcaattattcgatatgttt
cctcatacagaacattatgaaacattggcattattgatccttgattga
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