Xanthomonas oryzae pv. oryzae MAFF 311018: XOO3608
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Entry
XOO3608 CDS
T00360
Symbol
XOO3608
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xom
Xanthomonas oryzae pv. oryzae MAFF 311018
Pathway
xom00300
Lysine biosynthesis
xom00550
Peptidoglycan biosynthesis
xom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xom00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XOO3608 (XOO3608)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XOO3608 (XOO3608)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xom01011
]
XOO3608 (XOO3608)
Enzymes [BR:
xom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
XOO3608 (XOO3608)
Peptidoglycan biosynthesis and degradation proteins [BR:
xom01011
]
Precursor biosynthesis
Amino acid ligase
XOO3608 (XOO3608)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Scaffolding_pro
Motif
Other DBs
NCBI-ProteinID:
BAE70363
UniProt:
Q2NZB4
LinkDB
All DBs
Position
complement(4082880..4084367)
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AA seq
495 aa
AA seq
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MSRSMALSQLLPDVALPHDVQVSGLVMDSRTVAPGDAFVAIAGFGAHGLGFVEQARANGA
TAVLFEPPAPDGLPVPVDAIAVPGLRARLGVMADQFHGRPSHAMRMVGVTGTNGKTSTVQ
LLAQALTLLGTPTGTLGTLGVGLYGAAVSTGFTTPLVLPTHALLAQLRDEGAQAVAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGEMAQYGAAKAKLFTRPGLKAAVVNLDDGF
GRTLFASRDPVLRAIGVSSRAHADASVSAQALQLDHNGINFALNIQGEVHPVHSPLLGRF
NVDNLLAVAGALWALDIAPAQIATVLGQLQPIHGRMNRLGGAHGAPLVVVDYAHTPDALE
QALSSLRSHAQDRLICVFGCGGERDTGKRPQMAAIAELNADVAIVTDDNPRGEDGDAIVA
DILRGFARPDAAIVQRDRAAAIHQAIAMASASDIVLIAGKGHEPYQEVAGVRHAFDDAIV
AAQALLPRTVLGVRP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgttccatggcgctttcgcagttgctgccggacgtggcgctgccgcacgacgtg
caggtctccggtctggtgatggatagccgtaccgttgctccgggcgatgcgttcgtggcg
atcgccggcttcggtgcgcatggcctgggctttgtcgaacaagcgcgcgccaatggcgca
acagcggtgttgttcgagccgccggctccggacggtctgccggtccccgtcgatgcgatt
gccgtgcccggtttgcgcgcgcgccttggcgtgatggccgatcaatttcatggccggccg
tcgcatgcaatgcgcatggtcggcgtcactggcaccaatggcaagacctccaccgtacag
ttgctggcgcaggcgctgacgctgctcggtacgcccaccggcacgctcggcacccttggc
gtcggtctgtatggtgcggccgtgtcgaccggtttcaccacgccgctggtgctgcccacg
catgcgttgctggcgcagttgcgcgatgagggcgcgcaggcggtggcaatggaggtcagc
tcgcacgcgctcgatcagggccgcgtggatgcggtgcatttcgacgtcgcggtgttcacc
aatctcacccgcgatcatctcgattaccacggcgagatggcgcaatacggcgccgcgaag
gccaagctgttcacccgccctggcttgaaagccgccgtggtgaatctggacgatggcttc
ggccgcacgctgttcgcttcgcgcgatcccgtgctgcgcgcgatcggcgtgagctcgcgc
gcacatgccgatgccagcgtgagcgcgcaggcattgcagctggaccacaacggcatcaac
ttcgccctgaatatccagggcgaagtgcatccggtgcattcgccgttgctgggccgcttc
aacgtggacaacctgctggccgtggccggcgcgttgtgggcgctggacatcgcacccgcg
cagatcgccaccgtgctcggtcagttgcagccgatccatggccgcatgaaccgtctcggt
ggcgcacatggcgcaccattggtggtggtcgattacgcacacaccccggatgcgctggaa
caggcattgagcagcctgcgttcgcatgcgcaggaccggctgatctgcgtgttcggctgc
ggtggtgaacgtgacaccggcaaacgcccgcagatggcggcgattgcagaactcaacgcc
gatgtggcaatcgtcaccgacgacaacccgcgtggcgaagatggcgatgcgattgtggcc
gatatcctgcgcggcttcgcgcgcccggatgccgccatcgtacagcgcgaccgcgccgca
gcgatccatcaggccatcgccatggccagcgcgtccgacatcgtgttgatcgccggcaag
ggacacgagccataccaagaagttgccggcgtgcggcatgccttcgacgacgccatcgtg
gcggcgcaggcgctgctgccgcgcaccgtgttgggagtgcgcccatga
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