Xanthomonas oryzae pv. oryzae KACC 10331: XOO3394
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Entry
XOO3394 CDS
T00235
Symbol
acrF
Name
(GenBank) acriflavin resistance protein
KO
K18138
multidrug efflux pump
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo01501
beta-Lactam resistance
xoo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
XOO3394 (acrF)
01503 Cationic antimicrobial peptide (CAMP) resistance
XOO3394 (acrF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xoo02000
]
XOO3394 (acrF)
01504 Antimicrobial resistance genes [BR:
xoo01504
]
XOO3394 (acrF)
Transporters [BR:
xoo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
XOO3394 (acrF)
Antimicrobial resistance genes [BR:
xoo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
XOO3394 (acrF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
Motif
Other DBs
NCBI-ProteinID:
AAW76648
UniProt:
Q5GXC3
LinkDB
All DBs
Position
complement(3614584..3617709)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKLSDLSITRPVMAVVMSLLLIVLGVMSFTRLTLRELPAIDPPIVSVNVEYTGASAAVVE
SRITQVLEDGLAGIEGISTIEAHSRNGSSDISIEFVQSRDVEAAANDVRDAVSRVSDRMP
DQARAPEISKVEADADPILWLNMSSSTMDTLQLSDYAERYVVDRFSSLDGVAQVRIGGRQ
RYAMRIWLDRDQLAARDLTVADVEAALQNENVEVPAGSIESAQRDFTLRVERSYLKPEDF
AKLPLNKGEGGYVVRLGDVARVELSSAERRAYFQSNGVPNVGLGIVRNSTANALDVARKA
RARAIEVQKSLPQGTNIFVAFDTTTFIDAAVERVYHTLVEAVVLVLVVIWVFLGSARAAL
IPAVTVPVCLIASFIALYAFDFSINLLTLLALVLCIGLVVDDAIVVVENIQRRIDLGEPP
LVAAKRGTGQVAFAVIATTAVLVAVFVPVGFLQGNTGRLFRELAVALAAAVAISAFVALT
LTPMMSSKLLRAHGQAKPNRFHQWFDGRMQAVSGAYGRSLERHVHRTWVFALLMLLALGA
SAWLMGRIPSEVAPAEDRGNFQIMIDGPEGAGFDYTVGQMHQVEDILRPFVGPDKPIVRA
NPRVPGSFGSSEEMHTGRVSVFLQDWEKRTRPTTEVADEVQQKLNVLSGVRARTQVSGGL
VRRRGQPFQLVLGGPDYAEIAQWRDRILQRMEANPGLVGPDSDYKETRPQMRVNIDRVRA
ADLGVPVTAIGGALEALMGSRRVTTFVDNGEEYDVMLQAGREGRMSPEDLTAIRVRSNRG
ELIPLSNLVTLSEVAEAGTLNRFNRLRAITITAGLAPGYPLGDAIAWAQQAAQEELPEYA
QVDWKGESREYQQSGSAVLLTFGMALLVVYLVLAAQFESFAHPLVIMLTVPLAVLGALVG
LWLTGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDEGRSVHAAIVASASVRLRPIL
MTSIATVVGAIPLVVAGGPGSASRATIGVVVIFGVSLSTVLSLYVVPAFYSLIAPYTRSP
EAVARQLETLDAQTPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctccgacctgtcgatcacccgcccggtgatggcggtggtgatgagtttgctg
ctgatcgtgctgggggtgatgtcgttcacccgcctcaccctgcgcgagttgccggcgatc
gacccgcccatcgtctcggtgaatgtggaatacaccggtgcctcggcggcagtggtggaa
agccgcatcacccaggtactggaagacgggctggccggcatcgagggcatttccaccatt
gaagcgcacagccgcaatggctcctccgatatcagcatcgaattcgtgcaatcgcgcgat
gtggaagcggccgccaacgatgtgcgcgacgcggtcagccgcgtgtccgaccgcatgccc
gaccaggcgcgcgcgccggagatttccaaggtcgaagccgacgccgaccccatcctgtgg
ctcaacatgagctccagcaccatggacacgctgcagctgtccgactatgccgagcgctat
gtcgtcgaccgcttttccagcctggatggcgtggcgcaggtgcggatcggcggacgccag
cgctatgcaatgcgcatctggctggaccgcgaccaactggccgcacgcgacctcactgtc
gccgatgtggaagcggcgctgcagaacgaaaatgtggaagtgcctgccggcagtatcgaa
tcggcgcagcgcgatttcaccttgcgcgtggagcgcagttatctcaagcccgaagacttc
gccaagctgcccttgaacaagggcgagggcggttacgtggtgcgtctgggcgacgtggcc
agggtcgagctgagctcggccgagcggcgcgcgtatttccagagtaacggcgtgccgaat
gtgggcctgggcatcgtgcgtaactccaccgccaacgcgctggatgtggcccgcaaagca
cgcgcgcgcgctatagaagtgcagaagtcgctgccgcagggcacgaatattttcgtcgcc
ttcgacaccaccaccttcatcgacgccgcggtggagcgcgtttatcacacgctggtggaa
gcggtggtcctggtgctggtggtgatctgggtgtttctgggtagcgcgcgcgccgcattg
atccccgcggtgacggtgccggtgtgcctgatcgcctcctttatcgcgctgtatgcgttc
gatttttcgatcaacctgctcaccttgctggcgttggtgctgtgtatcggcttggtggtg
gacgacgccatcgtggtggtggaaaacatccagcgccgcatcgatctgggcgagccgccg
ctggtggccgccaagcgtggtaccgggcaggtggcgtttgcggtgattgcgaccaccgcg
gtgctggtggcggtctttgtgccggtcggttttctgcaaggcaataccgggcggctgttc
cgtgagctggcggtggcgctggcggcggcggtggcgatctcggccttcgtggcgctgacg
ttgacgcctatgatgtcgtccaagttgttgcgcgcgcatgggcaggccaaacccaatcgc
tttcaccaatggttcgatgggcgcatgcaggcggtgtccggtgcgtatgggcgctcgctg
gagcggcatgtgcaccgcacctgggtctttgcgctgctgatgctgttggcgctgggcgcc
agcgcatggctgatgggccgcattccttccgaagtggcgccggccgaggaccgcggcaat
ttccagatcatgatcgacggcccggaaggtgccggcttcgattacacggtggggcagatg
catcaggtggaagacatcctgcgccccttcgtgggcccggacaaacccatcgtgcgcgcc
aacccgcgcgtgcccggcagcttcggcagcagcgaggaaatgcacaccggccgggtcagc
gtgttcttgcaggattgggaaaagcgcacccgccccactaccgaagtggccgatgaggtg
cagcagaaactcaatgtgctcagcggcgtgcgtgcacgcacgcaggtgagcggaggcctg
gtgcgtcgccgtgggcaaccgttccagctggtgctgggcgggccggattacgcggagatt
gcgcagtggcgcgatcgcatcctgcagcgcatggaagccaaccccggcctggtcggcccc
gactccgattacaaggaaacccgcccgcagatgcgcgtcaatattgatcgcgtgcgcgcg
gccgatctcggcgtgccggtaactgcgattggcggcgcgctggaagcattgatgggctca
cgccgcgtcaccaccttcgtcgacaacggcgaggagtacgacgtgatgctgcaggccggg
cgcgaaggccgcatgtcgccggaagatctcaccgcgatccgcgtgcgctccaaccgtggc
gagctgattccgctttccaatctggtgactttgagcgaagtcgccgaagccggcaccttg
aaccgcttcaatcgcctgcgtgcaatcacgatcacggcgggcctggcaccaggttatcca
ctcggcgatgccatcgcctgggcgcagcaggcggcgcaggaagaactacccgaatacgcg
caagtggactggaagggcgaatcgcgcgaataccagcaatccggcagtgcggtgttgttg
accttcggcatggcgctgctggtggtgtatctggtgctggccgcgcagttcgaaagtttt
gcgcacccgttggtgatcatgctcacggtgccgttggcggtgctgggcgcgctggtgggc
ttgtggctgaccggtggcacgctcaacctgttcagtcagatcggcatcgtgatgctggtg
ggcctggcagccaagaacggcattctgattgtggaattcgccaaccaattgcgcgacgag
ggccgcagcgtgcatgcggcgatcgtggcgtcggcctcggtgcgtttgcgcccgatcctg
atgacctcgattgccacggtggtcggcgcgattccgctggtggtggccggcgggcccggc
tcggccagccgcgccacgattggcgtggtggtgatcttcggcgtctcgctgtccacggtg
ttgtcgctgtacgtggtgccggcgttttacagcctgatcgccccgtacaccaggtcgcct
gaagcggtggcacgccagctggaaaccctggacgcgcagacaccctcagtgggcggacat
gcgtga
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