Xanthomonas perforans: BJD13_04615
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Entry
BJD13_04615 CDS
T04778
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xpe03000
]
BJD13_04615
03021 Transcription machinery [BR:
xpe03021
]
BJD13_04615
03009 Ribosome biogenesis [BR:
xpe03009
]
BJD13_04615
Transcription factors [BR:
xpe03000
]
Prokaryotic type
Other transcription factors
Others
BJD13_04615
Transcription machinery [BR:
xpe03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
BJD13_04615
Ribosome biogenesis [BR:
xpe03009
]
Prokaryotic type
rRNA transcription factors
BJD13_04615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_N
zf-dskA_traR
ApoLp-III
DUF6381
DUF948
Motif
Other DBs
NCBI-ProteinID:
APO98438
UniProt:
A0A1L5R1A5
LinkDB
All DBs
Position
681902..682942
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AA seq
346 aa
AA seq
DB search
MAAKKPAKKAVEAAKKSAKPVAKKAATSAAAKPAAKPPAKQPAAKKAPAKKAPAKKAAAK
PAPASKTTASAAPKSVKPVAKSAAKPAAKKAAPAAAKPAAKPVASKSVPKPATKPAPAKS
VPVKAEKPAPAPVPKAVPAKPAKPATPSSKNPVPVSKSSAKTPTKTEAPAKPAATRPVGK
VAVAVTSKPSSAAPKTKYKVVEYKTDEATGRPILPQGYKPSADEEYMNKLQQEYFRQRLQ
SWRNEMVEESKQTIENLREEVRDIGDEAERATRETENSLELRARDRARKLISKIDSTLKR
LEDGDYGYCVDTGEEIGLDRLEARLTAERTIDAQERWEHLQKQQGD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaacctgcaaaaaaggccgtagaggccgccaagaagtccgccaaaccc
gttgcgaaaaaggcagcgacgtccgctgctgcgaaaccggccgcaaaaccgccggccaag
cagccggctgccaagaaggcacccgcgaagaaggcacctgcgaagaaagccgctgccaag
ccggcgccggcttccaagaccaccgcgtccgcagcccccaagtcagtgaaacccgtcgcc
aagagtgctgccaagccggcggcgaaaaaggcagctccggctgccgccaaaccggccgcc
aagccggtggcgtccaagtccgtaccgaagccggccaccaagccggctccggccaagtca
gtcccggtcaaggctgaaaagcccgcgcccgcaccggtccccaaggccgtccctgcgaag
ccggcaaagcctgcgaccccgtcatctaagaatcccgtgcccgtttcgaaatcttccgca
aaaacgccaactaaaaccgaagcccccgccaagcctgctgcgacccgtccggtcggcaag
gtggccgtggccgtgacgtccaagccgtccagcgcggctcccaagaccaagtacaaggtg
gtcgagtacaagaccgacgaagcaaccggtcgcccgatcctgccgcagggctacaagcct
tccgcggacgaggagtacatgaacaagttgcagcaggaatatttccgccagcgtctgcag
agctggcgcaacgagatggtggaggaatccaagcagaccatcgaaaacctgcgcgaagaa
gtacgcgacatcggcgacgaagccgaacgtgccacccgcgagaccgaaaactcgctggaa
ctgcgtgcccgtgatcgcgcccgcaagctgatttccaagatcgacagcacgctcaagcgt
ctggaagacggtgactacggctactgcgtggacaccggtgaagagattggcctggaccgc
ctggaagcgcgtctgactgccgagcgcaccatcgatgcccaggagcgttgggagcacttg
cagaagcagcagggcgactga
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