Xenorhabdus poinarii: XPG1_2238
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Entry
XPG1_2238 CDS
T03805
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase rumB
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
xpo
Xenorhabdus poinarii
Brite
KEGG Orthology (KO) [BR:
xpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xpo03009
]
XPG1_2238 (rumB)
Enzymes [BR:
xpo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
XPG1_2238 (rumB)
Ribosome biogenesis [BR:
xpo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XPG1_2238 (rumB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Methyltransf_ANTKMT
Methyltransf_37
Motif
Other DBs
NCBI-ProteinID:
CDG21893
UniProt:
A0A068R3W7
LinkDB
All DBs
Position
complement(2162675..2163808)
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AA seq
377 aa
AA seq
DB search
MQCVQYTVGHCHSCQWLDKPYSQQLSDKQQHLKQLLQETSVVHWLTPVTSKTSEFRNKAK
MVVSGSVERPLLGMLHRDGRTVDLCDCPLYPKYFQPVFAVIKTFIARAGLVPYNVERKKG
ELKYILLTESRANGEMMLRFVLRSETKLAQLVRALPWLKAQLPQATVISANIQPTHMAIL
EGEKEIILTERKMLTERFNGIPLYIRPRSFFQTNPDIAAELYATAGRWVRELGINSLWDL
FCGAGGFGLHCADKKTRLTGIEISAEAISCAKSSAKSLGLEHVDFQALDSTHFALDKSQL
PELVLVNPPRRGIGKALCEYLSRMAPKFILYSSCHAETMAKDITMLKQYRIEKIQLFDMF
PHTEHYETLALLVLDVN
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgtgcagtataccgtggggcattgtcactcctgccagtggctcgataagccc
tattcacagcaattatcggataaacaacaacatttaaaacaactgttacaggaaacatca
gtagtacattggctgacaccggtgaccagcaaaaccagcgaatttcgtaacaaagccaaa
atggtcgtcagtggcagtgtcgagcgtccgttgcttggtatgttgcatcgtgatggcaga
acggtggatctttgtgattgtccgctgtatccaaaatattttcagccggtatttgctgta
ataaaaacatttatcgctagagctggtctggttccatacaacgttgaacgaaagaaagga
gaattaaaatatattcttctgacagaaagccgcgctaatggtgaaatgatgttgcgcttt
gttttgcgttcggaaacaaagctggctcagttagtacgggctttgccttggctgaaagcg
caactgccgcaagcgaccgttatctccgcgaatattcaacctacccatatggcgattttg
gaaggcgaaaaggaaatcattttgactgagcgcaaaatgttgacggaaaggtttaacggt
attccgttgtatattcgcccacggagtttttttcagacgaacccggatattgccgccgaa
ctgtatgcaacagcagggcgttgggttagggaattgggcattaacagtttgtgggatctg
ttttgcggtgcgggtggttttggtctgcattgcgcagataaaaagaccaggctgacgggg
attgagatcagcgctgaagcaatcagttgtgcgaaaagttcggctaaaagtcttggattg
gaacacgtggattttcaggcgctggattccacacatttcgcccttgataaatcacaactg
ccagaattagttttggtaaacccaccccgacgagggattggcaaggcgctttgtgaatat
cttagccggatggcgcccaaatttattctctattcaagttgtcatgccgagacgatggcg
aaagatattacgatgcttaagcaatatcgtatcgagaagattcagctattcgatatgttt
ccccatactgaacattatgaaaccttggccctgttagttcttgacgtaaattaa
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