Xanthomonas prunicola: MUG10_01315
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Entry
MUG10_01315 CDS
T08368
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
xpr
Xanthomonas prunicola
Pathway
xpr03030
DNA replication
xpr03410
Base excision repair
xpr03420
Nucleotide excision repair
xpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUG10_01315 (ligA)
03410 Base excision repair
MUG10_01315 (ligA)
03420 Nucleotide excision repair
MUG10_01315 (ligA)
03430 Mismatch repair
MUG10_01315 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpr03032
]
MUG10_01315 (ligA)
03400 DNA repair and recombination proteins [BR:
xpr03400
]
MUG10_01315 (ligA)
Enzymes [BR:
xpr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUG10_01315 (ligA)
DNA replication proteins [BR:
xpr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUG10_01315 (ligA)
DNA repair and recombination proteins [BR:
xpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUG10_01315 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUG10_01315 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUG10_01315 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUG10_01315 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
DUF7501
Motif
Other DBs
NCBI-ProteinID:
USJ00933
LinkDB
All DBs
Position
complement(259569..262070)
Genome browser
AA seq
833 aa
AA seq
DB search
MTVSPDPAQRIDALRRRIEDANYRYHVLDEPQMADVDYDRLMRELEALEAAHPALASADS
PTQRVGHLAASRFAEVRHALPMLSLGNAFSDEEVSEFVRRISERLERKQPVFSAEPKLDG
LAISLRYENGEFVQGATRGDGATGEDVSANLRTVKAIPLRLRGEGWPQVLEVRGEVYMPR
AAFETYNAQMRAQGGKVLANPRNGAAGSLRQLDARITAQRPLSFFAYGVGEVSEGTLPQT
HSAILAQLRAWGFPVSALVEVVQGSDGLLAYYQRIGEARDGLPFDIDGVVYKLDDLVGQR
EMGFVSRAPRWAIAHKFPAQEQSTTVEAIEIQIGRTGAATPVARLKPVHVAGVIVTNATL
HNADQIARLDVRVGDTVIVRRAGDVIPEVAAVVADQRPSGTQAWQMPTQCPVCGSEIVRE
EGQAVWRCSGELTCPAQRKEAFRHFVSRRAMDVDGLGEKFIEVLVDSGLVQGVADLYLLT
VDQLLQLRMISTAESPHAFLREAREHLATGAYAQLETTVASIGVDLAGERETPQSWQADL
LRAGLPSFDWNRRKIATKWAENLIEAIETSRDTTLERFLFALGIEHVGESTAKALSAWFG
DLELIRHLPWPLFKRVPDIGGEVARSLGHFFDQPGNQKAIDHLLARKVRIGDTHPPSPKL
RGELSLANLLEDLEIPKVTPIRAAQIATAFGSIDALRNGGPEPLVEAGVPQSVAESLATW
LLVPANDTLAVNAQKKLSELLAMMPEAGEEKTGPLDGQTVVITGTLAALTRDAAKQRLEA
LGAKVAGSVSKKTAFLVAGEQAGSKLDKAQSLGVDIWDEARLLAFLSEHGQQP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcagcccggaccccgctcagcgcattgatgccctgcgccggcgaatcgaagac
gccaattaccggtatcacgtgctcgacgagccgcagatggccgacgtcgactacgaccgc
ctgatgcgcgagctggaagcgctggaagcggcgcacccggcactggccagtgccgattcg
ccaacgcaacgggtgggccatctggccgcatcgcggtttgccgaagtgcggcatgccttg
ccgatgttgtcgctgggcaatgccttcagcgacgaggaagtgagcgagttcgttcgtcgc
atcagtgagcggctggagcgcaaacaaccggtgttctcggccgaacccaaactcgatggc
ctggcgatcagcctgcgctacgaaaacggcgagttcgtgcaaggtgccacgcgcggcgat
ggtgccaccggcgaggatgtcagtgccaacctgcgcaccgtcaaggcgattccgctgcgc
ctgcgcggcgagggttggccgcaggtgttggaagtgcgcggtgaggtctatatgccacgc
gccgcgttcgaaacctacaacgcgcagatgcgcgctcagggcggcaaggtgctggccaac
ccgcgcaatggcgcggccggctcgctgcggcagctggacgcgcgcatcaccgcgcagcgc
ccgctgagtttctttgcgtacggcgtcggcgaggtgagcgaaggcacgttgccgcagacc
cattcggcgatcctggcgcagctgcgtgcgtggggcttcccggtcagtgcgctggtcgag
gtggtgcagggcagcgacggcctgttggcgtattaccagcgcatcggtgaagcgcgcgac
ggcttgcccttcgatatcgatggcgtggtctacaagctcgacgatctggtcgggcagcgc
gagatgggattcgtctcgcgcgcgccgcgttgggcgatcgcgcacaagttcccggcgcag
gaacagtccaccacggtcgaagccatcgagatccagatcggccgcaccggtgcggccacg
ccggtggcgcgactgaagccggtgcatgtggccggggtgatcgtcaccaatgccacgctg
cacaacgccgaccagatcgcgcggctggatgtgcgcgtgggcgatacggtgatcgtgcgc
cgcgccggtgatgtgatccccgaagtggccgccgtggtggccgaccagcgcccgtccggg
acccaggcgtggcagatgcccacgcaatgcccggtctgcgggtcggagatcgtgcgcgaa
gaaggccaggcggtgtggcgctgctccggcgaattgacctgcccggcgcagcgcaaggaa
gccttccggcatttcgtttcgcggcgcgcgatggatgtggacggactgggcgaaaaattc
atcgaggtactggtcgacagcggcttggtgcaaggtgtggccgatctgtatctgctgact
gtggatcagctgctgcaactgcgcatgatcagcaccgccgagagcccgcatgcgttcttg
cgtgaggcgcgcgagcatctggcaaccggtgcgtatgcgcagctggaaaccaccgtggcg
agcatcggcgtggatctggccggcgagcgcgagacgccgcagagctggcaggccgacctg
ctgcgtgcggggctgccgagcttcgattggaaccgccgcaagatcgccaccaaatgggcc
gagaacctgatcgaggcgatcgaaacatcgcgcgacaccacgctggagcgttttctgttt
gcgctgggcatcgaacacgtaggtgaaagcacggcgaaggcgttgtcggcgtggttcggc
gatctggaattgattcgtcatctgccgtggccgctgttcaagcgcgtgcccgacatcggt
ggcgaagtggcgcgttcgcttgggcatttcttcgatcagcccgggaatcagaaggccatc
gatcatctgctggcgcgcaaggtgcgcatcggcgacacccatccgccttcgccgaagctg
cgcggcgagttgagcttggccaatttgctggaggacctggagattcccaaggtgacgccg
attcgtgccgcccagatcgcgactgcgtttggttccatcgatgccctgcgcaatggcggt
cccgagcctctcgtcgaagcgggtgtaccgcagtcagtggccgagtcgctcgcgacttgg
ctgttggtaccggccaacgacacgctcgcggttaatgcccagaaaaagctttccgagctg
ctggctatgatgccggaggctggcgaagaaaagaccggcccgctcgatggccagaccgtg
gtcatcaccgggaccttggctgcgctcacgcgcgacgcggccaagcaacgcctcgaagca
ctgggtgccaaggtcgccggtagcgtctccaagaaaacggcgtttctggtggccggcgaa
caagccggttccaagctcgacaaggcgcaatcgctgggcgtggacatctgggacgaagcg
cgtttgctggccttcctgagcgaacacggccaacagccatga
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