Xenorhabdus stockiae: AB0856_002732
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Entry
AB0856_002732 CDS
T11396
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
xsk Xenorhabdus stockiae
Brite
KEGG Orthology (KO) [BR:
xsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xsk03009
]
AB0856_002732 (rlmC)
Enzymes [BR:
xsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
AB0856_002732 (rlmC)
Ribosome biogenesis [BR:
xsk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB0856_002732 (rlmC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_ANTKMT
Methyltransf_11
Methyltransf_37
UPF0020
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
YAP81492
LinkDB
All DBs
Position
complement(3178681..3179814)
Genome browser
AA seq
377 aa
AA seq
DB search
MQCAQYTAGHCHSCQWLDKSYLNQLSDKQEHLQQLLRDTPNTRWQPPVASQLSEFRNKAK
MVVSGSVERPLLGMLHRDGRTVDLCDCPLYPQHFQPVFDVIKIFIAKAGLVPYNVARKKG
ELKYILLTESRADKEMMLRFVLRSETKLEQLQRSLPWLQEQLPQLTVISANIQPTHMAIL
EGEKEIIFTEKKMLKENFNNIPLYIRPRSFFQTNPAIASQLYMTAGQWVRELNIGSMWDL
FCGAGGFGLHCADKETKLTGIEISEEAIACARNSADSLGLKHVEFQALDSTHFALEKSQT
PELVLVNPPRRGIGKELCQYLNRMAPEYILYSSCNAETMAKDITMLERYRIEKVQLFDMF
PHTEHYETLALLVLNNG
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtgcgcagtataccgcggggcattgtcactcctgccagtggcttgataagtcc
tatttaaatcagttatcagataaacaagaacatttacaacagcttttacgagatactcca
aacacgcgctggcaaccccctgttgccagccagcttagtgagtttcgtaataaggctaaa
atggtcgtgagtggcagtgttgagcgcccgctgctcggaatgctgcatagggatggcaga
acagtcgatctttgtgattgtcctttgtatccgcaacactttcagccagtctttgacgta
ataaaaatatttatcgctaaagcggggttagtcccatacaacgttgcacgtaaaaaaggt
gaactgaaatacattctgttgaccgaaagccgggctgataaagaaatgatgctgaggttt
gtgttgcgttcagaaacaaaactggaacagttacaacgatccttaccatggttacaggaa
cagttaccacagctgacggtaatttctgcgaatatccaaccgacacatatggcgatcctt
gaaggtgaaaaagagattattttcactgaaaagaaaatgttgaaggaaaatttcaataat
attccgttgtatattcggccccggagtttcttccagacgaatcctgctattgcttcgcag
ttatatatgacagcagggcagtgggtcagggagctgaacataggcagtatgtgggatctg
ttttgtggcgcgggaggttttggtctgcattgtgcagataaagaaaccaagctgacaggc
attgaaatcagtgaggaagctattgcctgcgccagaaattcagctgacagtctcgggctc
aaacatgttgagtttcaggctctggattctacgcatttcgcccttgagaaatcgcaaact
ccggagttggtattagtcaatccgcctcgaaggggaattggtaaagaactttgccagtat
cttaaccgaatggcacctgagtatattctttactcaagttgtaatgcggaaacgatggca
aaagatatcaccatgctcgaacgataccgaatagaaaaagtgcagttattcgatatgttt
ccacacactgagcattatgaaacactggctctgttggttctgaataacggttag
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