Xanthomonas sontii: RAB70_08875
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Entry
RAB70_08875 CDS
T10538
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
xso Xanthomonas sontii
Pathway
xso01501
beta-Lactam resistance
xso01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAB70_08875
01503 Cationic antimicrobial peptide (CAMP) resistance
RAB70_08875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xso02000
]
RAB70_08875
01504 Antimicrobial resistance genes [BR:
xso01504
]
RAB70_08875
Transporters [BR:
xso02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RAB70_08875
Antimicrobial resistance genes [BR:
xso01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RAB70_08875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RNA_pol_Rpb1_7
DUF4407
Motif
Other DBs
NCBI-ProteinID:
XCI86364
LinkDB
All DBs
Position
2100047..2103172
Genome browser
AA seq
1041 aa
AA seq
DB search
MRLSDVSITRPVFAAVMSLLLVVLGVMAYSRLTLRELPAIDPPIVSVEVRYPGASAAVVE
SRITQVLEDALAGIEGIETIQARSSNGVADISIEFRATRDIEAAANDVRDAVSRVLDRLP
DEADAPEIAKVEADADAILWLNMSSSTMDALQLSDYAERYVVDRLSSIDGVAQVRLGGRQ
RYAMRIWLDRDQLAARDLTVADVENALARENVELPAGRLESADRDFTLRVERSYRAPADF
ATIPLGKGRDGYVVRLGDVAKVELASAERRAYFRSNGVPNVGLGIVKTSTANSLDVARAA
RAAAQQIQQTLPKGTQIFVAFDSTVFIDASVERVYHTLIEAVVLVLVVIWLFLGSVRAAL
IPAVTVPVCLVAAFIALYAFGFSINLLTLLALVLCIGLVVDDAIVVVENIQRRVDLGEPA
LVAARRGTAQVAFAVIATTAVLVAVFLPVGFLEGNTGRLFRELAVALAAAVAISAFVALT
LTPMMSSKLLKAHAREKPNRVHGWVEARLQGLSARYRRVLERHVGRAWVFGALMLAALAA
SALLARMIPSELAPAEDRGSFQVMIDAPEGAGFDYTVGQMHQVEAILDRHRGDGQPIARA
NPRVPGSFGASEEMHTGRVSVFLRDWSERDVATADVAATLQEELRALPGVRARTQVGGGL
VNSRGQPFQIVLGGPDYAEIAQWRDRLLARIADNPGLVGADSDYKETRPQMRVEIDRQRA
ADLGVPVTEIGRALETLMGARQVTTFVDNGEEYDVMLQASRDGRADPADLAAIRVRADSG
QLIPLSNLVTLREVAEPGNLHRFNRLRAITINAGLAPGYPLGEAIAWAQQVAREELPDYA
QLDWKGESREYQKAGGAVLLTFALALLIVYLVLAAQFESFIHPLVIMLTVPLGVLGALIG
LAISGGTLNLFSQIGIVMLVGLAAKNGILIVEFANQLRDAGRSVRDAIVEASAVRLRPIL
MTSLATVVGAIPLVVAGGPGSASRATIGIVVIFGVSVSTLLSLFVVPAFYALLAPYTRSP
DAVQQRLQQLEAQTPSVGGHA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgtccgacgtctccatcacccggccggtgttcgccgcggtgatgagcctgttg
ctggtggtgctgggggtgatggcgtacagccggctgaccctgcgcgagttgccggcgatc
gatccgccgatcgtgtcggtggaggtgcgctaccccggcgcctcggcggcggtggtggag
agccgcatcacccaggtgctggaggacgcgctggccggcatcgaaggcatcgagacgatc
caggcgcgcagttccaacggcgtggccgacatcagcatcgagttccgcgccacccgcgac
atcgaggccgccgccaacgatgtgcgcgacgcggtcagccgcgtgctcgaccgcctgccc
gacgaggccgacgcgccggagatcgccaaggtcgaggccgatgccgatgccatcctgtgg
ctcaacatgagctccagcacgatggatgcgctgcagctatccgactacgccgaacgctac
gtggtcgatcggctctccagcatcgatggcgtggcccaggtgcgcctgggcgggcgccag
cgctatgcgatgcggatctggctggaccgcgaccagttggccgcgcgcgacctcaccgtg
gccgacgtggagaacgcgctggcccgcgagaacgtggaactgccggccggccgcctggag
tcggccgaccgcgacttcaccctgcgcgtggagcgcagctaccgcgcaccggcggatttc
gccacgattccgctcggcaagggccgcgacggctacgtggtgcggctgggcgacgtggcc
aaggtggaactggcctcggccgagcgccgcgcctacttccgcagcaacggcgtgcccaac
gtcggcctgggcatcgtcaagacctccaccgccaacagcctggatgtggcccgcgccgcg
cgtgcggccgcgcagcagatccagcagaccctgcccaagggcactcagatcttcgtcgcc
ttcgattccaccgtgttcatcgatgcctcggtggaacgcgtctaccacaccctgatcgag
gcggtggtgctggtgctggtggtgatctggctgttcctgggcagcgtgcgcgcggcgctg
atcccggcggtgacggtgccggtgtgcctggtggccgcgttcatcgcgctgtatgcgttc
ggcttctcgatcaacctgctgaccctgctcgctctggtgctgtgcatcggcctggtggtg
gacgatgcgatcgtggtggtggagaacatccagcgtcgcgtcgacctgggcgaaccggcg
ctggtggcggcgcggcgcggcaccgcgcaggtcgccttcgcggtgatcgccaccaccgcg
gtgctggtggcggtgttcctgccggtcggtttcctagaaggcaacaccgggcgcctgttc
cgcgaattggcggtggcgctggccgcggcggtggcgatctccgccttcgtcgcgctgacc
ctgaccccgatgatgtcgtccaagctgctcaaggcgcacgcgcgcgagaagcccaaccgc
gtgcatggctgggtcgaggcgcggctgcaggggctgagcgcgcgctaccggcgcgtgctc
gagcgccacgtcggccgcgcctgggtgttcggcgcgctgatgctggcggcgctggcggcc
agcgcgctgctggcgcggatgattccctcggaactggcgccggccgaggaccgcggctcg
ttccaggtgatgatcgatgcgccggaaggcgccggcttcgactacaccgtggggcagatg
caccaggtcgaggccatcctcgaccgccaccgcggcgacggccagccgatcgcgcgcgcc
aacccgcgcgtgcccggcagcttcggcgccagcgaggagatgcacaccggccgggtcagc
gtgttcctgcgcgactggagcgagcgcgacgtggccaccgccgacgtcgccgcgacgctg
caggaagagttgcgcgccttgcccggcgtgcgtgcgcgcacccaggtcggcggcggcctg
gtcaacagtcgcgggcagccgttccagatcgtgctcggcggccccgactacgccgagatc
gcgcagtggcgcgaccgcctgctcgcgcgcatcgccgacaaccccgggctggtcggggcg
gactcggactacaaggaaacccggccgcagatgcgcgtggagatcgaccgtcagcgggca
gccgacctcggcgtgccggtgaccgagatcggccgcgcgctggagacgctgatgggcgcg
cgccaggtcaccaccttcgtcgacaacggcgaggagtacgacgtgatgctgcaggccagt
cgcgacggccgcgccgatccggccgacctggcggcgatccgggtacgcgccgacagcggc
cagctgatcccgctgtccaacctggtgaccctgcgcgaagtcgccgagccgggcaacctg
caccgcttcaatcgcctgcgtgccatcaccatcaacgccggcctggccccgggctacccg
ctcggcgaggcgatcgcctgggcgcagcaggtggcgcgcgaggaactgcccgattacgcg
cagctcgactggaagggcgaatcgcgcgagtaccagaaggccggcggcgcggtgctgctg
accttcgcactggccttgctgatcgtgtatctggtgctggcggcgcagttcgagagcttc
atccacccgctggtgatcatgctgaccgtaccgctgggcgtgctcggcgcgctgatcggc
ctggcgatcagcggcggtacgctcaacctgttcagtcagatcggcatcgtcatgctggtc
gggctggcggccaagaacggcatcctgatcgtcgagttcgccaatcagttgcgcgatgcc
gggcgcagcgtgcgcgacgcgattgtagaagcctcggcggtgcgcctgcggccgatcctg
atgacctcgctggccaccgtggtcggcgcgatcccgctggtggtcgccggcggccccgga
tcggccagccgcgccaccatcggcatcgtggtgatcttcggcgtgtcggtgtccacgctg
ctgtcgctgttcgtggtgccggcgttctatgcgctgctggcgccgtacacgcgctcgccg
gacgcggtgcagcagcgcctgcagcaactggaggcgcagaccccgtcggtcggcggccac
gcctga
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integrated database retrieval system
