Xanthomonas sontii: RAB70_11890
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Entry
RAB70_11890 CDS
T10538
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xso Xanthomonas sontii
Pathway
xso01501
beta-Lactam resistance
xso01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RAB70_11890
01503 Cationic antimicrobial peptide (CAMP) resistance
RAB70_11890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xso03036
]
RAB70_11890
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xso02000
]
RAB70_11890
01504 Antimicrobial resistance genes [BR:
xso01504
]
RAB70_11890
Chromosome and associated proteins [BR:
xso03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
RAB70_11890
Transporters [BR:
xso02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
RAB70_11890
Antimicrobial resistance genes [BR:
xso01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RAB70_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
YknX_C
BSH_CusB
Beta-barrel_RND_2
HH_EMRA
DUF1344
BSH_CzcB
SOAR
Motif
Other DBs
NCBI-ProteinID:
XCI82973
LinkDB
All DBs
Position
2821564..2822727
Genome browser
AA seq
387 aa
AA seq
DB search
MPAPFVQRRRALPLLLSVVVLAFAGCKGGGKAPAPAAKTVEVVTLQPQSVPLSVELAGRT
VASEESEVRPQVSGILRQRLFEEGATVRAGQPLFQIEPTLYQAAANQAQANLATAEATLA
AATLRAERYRTLGKTRLAAQQDVDDAQAAYKQALASRDAQRAALDTARTQLRFATVLAPI
GGRIGRARVTPGALVTANQTDAIAKIQQLDPMNVDITQSGNQFLALRRAIAAGGVQPAST
QVRLTLSDGTAYPLPGTLEFADLDVEETTGAVTLRARFPNPDAQLLPGMYVRALVGQGVR
QQALLVPQAAVDRTPRGEAVAWVVGADDVVRQREFTTLRAVGDRWLVGDGLKPGERVVVA
GRQGLSDGAKVTVKTAAAAAAPAAGQG
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcctttcgtccagcgccgccgcgcgctgccgttgctgctgtccgtcgtcgtg
ctcgcgttcgccggctgcaaggggggaggcaaggccccggcgccggcagcgaagacggtg
gaggtggtgaccctgcagccgcagagcgtgccgctgagcgtggaactggccgggcgtacc
gtggcctcggaagaatcggaggtgcggccgcaggtcagcggcatcctgcgccagcggctg
ttcgaggagggcgccacggtgcgggccgggcagccgctgttccagatcgagccgaccctg
taccaggccgcggccaaccaggcgcaggccaacctggccaccgccgaggccacgctcgcc
gccgccacgctgcgcgccgagcgttaccgcaccctgggcaagacccggctggccgcgcag
caggacgtggacgatgcgcaggccgcctacaagcaggcgctggccagccgcgacgcgcaa
cgcgcggcgctggacaccgcgcgcacgcagctgcgcttcgccacggtgctggcgccgatc
ggcgggcgcatcggccgcgcgcgggtgacccccggcgcgctggtcaccgccaatcagacc
gatgccatcgccaagatccagcaactggatccgatgaacgtggacatcacccagtccggc
aatcagttcctggcgctgcgtcgggcgattgccgccggcggcgtgcagccggccagcacg
caggtacggctgaccctgtccgacggtactgcgtatccgctgccgggcacgctggagttc
gccgacctcgacgtggaggagaccactggtgcggtgaccctgcgcgcgcgtttccccaat
cccgatgcgcaactgttgccgggcatgtatgtgcgcgcgctggtcgggcagggcgtgcgc
cagcaggcgctgctggtgccgcaggcggcggtggaccgcaccccgcgcggcgaggcggtg
gcctgggtggtgggcgccgacgacgtggtgcgccagcgcgagttcaccacgctgcgcgcg
gtcggcgaccgctggctggtcggcgatggcctcaagcccggcgagcgggtggtggtggcg
ggccggcaaggcctcagcgacggtgccaaggtgacggtgaagaccgccgccgccgcggcc
gcgcctgccgccggccagggctga
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