Xanthomonas sontii: RAB70_12340
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Entry
RAB70_12340 CDS
T10538
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
xso Xanthomonas sontii
Pathway
xso00020
Citrate cycle (TCA cycle)
xso00785
Lipoic acid metabolism
xso01100
Metabolic pathways
xso01110
Biosynthesis of secondary metabolites
xso01120
Microbial metabolism in diverse environments
xso01200
Carbon metabolism
xso01210
2-Oxocarboxylic acid metabolism
Module
xso_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xso_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
xso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RAB70_12340
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RAB70_12340
Enzymes [BR:
xso01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RAB70_12340
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Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
XCI83060
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All DBs
Position
complement(2922902..2925727)
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AA seq
941 aa
AA seq
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MDNLLKQFAQSSQLAGGNAAYIEDLYEQYLVSPDSIDPKWKTYFDGFQGRDAGDVPHSAV
IAHIASAARQAANSGTGPSGDERERHVGRLITAYRSRGHLGARLDPLGLTPPVNPPDLGL
PFHSLSESDLGSEFSTGGLGGQPRMKLRDLLARLKATYTGSIGSEFMHISEFEQRQWIYQ
RLENAGGNIAGDTASRRRTLERITAAEGLERYLHTKYVGQKRFSLEGGDSLIPMMDVLVQ
RAGSDTVKDIVVGMAHRGRLNVLVNTLGKNPRKLFDEFEGKFEHAHDDRAHTGDVKYHMG
FSADVAVADGKSVHLALAFNPSHLEIVDPVVVGSVRSRQERYGDAARKSVLPVIIHGDAA
FAGQGVVMELFQMSQARGFAVGGTVHIVVNNQIGFTTSARDDARSTLYCTDVAKMIGAPV
FHVNGDDPDAVAFVANLAYDFRQQFNKDVVIDLVCYRRWGHNEADEPAATQPVMYQTIRK
HKTTRELYAAQLESEGVLQAGEAQALVDGYRNKLDSGEYTTELATRKPDEFAIDWSKYLS
GKLSDKVDTTVKRKTLDQLAKIITTIPGGVELHPRVAKIYEDRVKMAAGELPGDWGFAEN
LAYATLLGEGHKLRLVGQDAGRGTFFHRHAILHDQKTDSYYLPLRQLVENPEDATVIDSL
LSEEAVMGFEYGYSTTDPNALCIWEAQFGDFANGAQVVIDQFIAAGEAKWGRISGLSLFL
PHGYEGQGPEHSSARLERFLQLCALENMLVCVPTTPAQAFHMIRRQMRMSTRKPLVVMTP
KSLLRHKLAVSTLEELADGEFQHLIPDAKADPKKVKRVVACSGKVYYDLLEDQTKRGQDD
VAILRVEQLYPFPRELLSAELKRYGNATDLVWCQEEPQNQGAWYQIKHHLQACLADGQSL
HYAGRARSPSPAAGHFAEHVEEQLKLVADALLNPFNDQVAE
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
gtggacaatctactcaagcagtttgcgcagtcatcgcaactcgccggcggcaatgccgcc
tatatcgaagacctgtacgaacagtatctggtctctcccgacagcatcgatcccaagtgg
aaaacctacttcgacggcttccagggccgcgatgccggtgacgtcccccactcggcggtc
atcgcccacatcgccagcgccgcgcgccaggccgccaacagcggcaccggcccgagcggc
gacgagcgcgagcgccatgtcggccgcctgatcaccgcctaccgttcgcgcggccacctc
ggcgcgcggctggatccgctgggcctgaccccgccggtgaacccgccggacctgggcctg
ccgttccacagcctgtcggaaagcgatctgggcagcgagttcagcaccggcggcctcggt
ggccagccgcggatgaaactgcgcgacctgctggcgcggctgaaggcgacctacaccggg
tcgatcggcagcgagttcatgcacatctccgagttcgaacagcgccagtggatctaccag
cgcctggagaacgcgggcggcaacatcgccggcgacaccgccagccgccgccgcaccctg
gagcggatcaccgccgccgagggcctggagcgctacctgcacaccaagtacgtcggccag
aagcgcttctcgctggaaggcggcgactcgctgatcccgatgatggacgtgctggtgcag
cgcgccggcagcgacacggtcaaggacatcgtggtcggcatggcccaccgcggccgcctc
aacgtgctggtcaacaccctgggcaagaacccgcgcaagctgttcgacgagttcgaaggc
aagttcgagcacgcccacgacgaccgcgcccacaccggcgacgtgaagtaccacatgggc
ttctccgccgacgtggcggtggccgacggcaagtcggtgcacctggcgctggcgttcaac
ccctcgcatctggaaatcgtcgaccccgtggtggtcggcagcgtgcggtcgcgccaggag
cgctacggcgacgccgcgcgcaagtcggtgctgccggtgatcatccacggcgacgccgcg
ttcgccggccagggcgtggtcatggagctgttccagatgtcgcaggcgcgcggcttcgcg
gtcggcggcaccgtgcacatcgtggtcaacaaccagatcggcttcaccaccagcgcccgc
gacgacgcccgttccacgctgtactgcaccgacgtggccaagatgatcggcgcgccggtg
ttccatgtgaatggcgacgatccggacgcggtggcgttcgtggccaacctggcctacgac
ttccgccagcagttcaacaaggacgtggtcatcgacctggtctgctaccgccgctggggc
cacaacgaggccgacgagccggcggccacccagccggtgatgtaccagaccatccgcaag
cacaagaccacccgcgaactgtacgccgcccagctggaaagcgaaggcgtgctgcaggcc
ggcgaggcgcaggcgctggtcgacggctaccgcaacaagctcgactcgggcgaatacacc
accgagctggcgacccgcaagcccgacgagttcgccatcgactggtccaagtacctgtcg
ggcaagctgtcggacaaggtcgacaccacggtcaagcgcaagaccctggaccagctggcc
aagatcatcaccaccatcccgggcggcgtcgagctgcacccgcgcgtggccaagatctac
gaggaccgggtgaagatggccgccggcgaactgccgggcgactggggcttcgccgagaac
ctggcctacgccaccctgctgggcgaaggccacaagctgcgcctggtcggccaggacgcg
ggccgcggcacgttcttccaccgccacgcgatcctgcacgaccagaagaccgacagctac
tacctgccgctgcggcagctggtggagaacccggaagacgccaccgtgatcgactcgctg
ctcagcgaggaggcggtgatgggcttcgagtacggctactccaccaccgatcccaacgcg
ctgtgcatctgggaagcgcagttcggcgacttcgccaacggcgcgcaggtggtgatcgac
cagttcatcgccgccggcgaagccaagtggggccgcatctcgggcctgtcgctgttcctg
ccgcacggctacgaaggccagggcccggagcacagctccgcacgcctggagcgcttcctg
cagctgtgcgcgctggagaacatgctggtctgcgtgccgaccaccccggcgcaggccttc
cacatgatccgccggcagatgcgcatgtccacgcgcaagccgctggtggtgatgacgccc
aagtcgctgctgcgccacaagctggcggtgtcgacgctggaggaactggccgacggcgag
ttccagcacctgatcccggacgccaaggccgacccgaagaaggtcaagcgcgtggtcgcg
tgctcgggcaaggtctactacgacctgctcgaggaccagaccaagcgcggccaggacgac
gtcgccatcctgcgcgtggagcagctgtatccgttcccgcgcgagctgctgtcggccgaa
ctgaagcgctacggcaatgccaccgacttggtctggtgtcaggaagagccgcagaaccag
ggcgcctggtaccagatcaagcaccacctgcaggcctgcctggccgacggacagagcctg
cactacgccggccgcgcccgttcgccgtctcccgccgccggccacttcgccgagcacgtg
gaagagcagctgaagctggtcgccgatgcgctgttgaatccgttcaacgaccaagtcgct
gaataa
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