Xanthomonas translucens pv. undulosa: FD63_16025
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Entry
FD63_16025 CDS
T03961
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xtn
Xanthomonas translucens pv. undulosa
Pathway
xtn00300
Lysine biosynthesis
xtn00550
Peptidoglycan biosynthesis
xtn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FD63_16025
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FD63_16025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xtn01011
]
FD63_16025
Enzymes [BR:
xtn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FD63_16025
Peptidoglycan biosynthesis and degradation proteins [BR:
xtn01011
]
Precursor biosynthesis
Amino acid ligase
FD63_16025
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
PreAtp-grasp
Motif
Other DBs
NCBI-ProteinID:
AKK68870
LinkDB
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Position
complement(3717000..3718493)
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AA seq
497 aa
AA seq
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MSRALPLSQLLPDLALARDVQVSGLVMDSRAVHAGDAFVAIAGFGAHGLGFVAQARANGA
AAILFEPPAPAELPAPADAIAVPGLRARMGAMADQFHGHPSQTMAMVGVTGTNGKTSTVQ
LLAQAWQCLGTRSGSIGTLGVGLYGAVVPTGFTTPLVLQTHALLAQLRDAGAQAVAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGDMAGYGAAKARLFATPGLKAAVVNLDDAF
GGDLLATLDPALRRIGISSRGQAGATLRGEALRLDARGIGFDLLIDGACHPVQSPLLGRF
NVDNLLAVAGVLHALDVAPARIAATLSQLQPIRGRMNRLGGRDAQPLLVIDYAHTPDALE
QALDSLRGHAHGRLLCVFGCGGERDTGKRPQMAAIAQRLADAVIVTDDNPRGEDGDRIVA
DILAGFTDLQAVRVQRDRAQAIALAVAEAGPDDIVLIAGKGHEPYQDIAGIQHPFDDTEI
AAQALQARAAGVMERAR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgcgctgccgctgtcgcagctgctgccggatctggcgttggcgcgcgacgtg
caggtgtccgggcttgtcatggacagccgcgccgtgcacgcaggcgatgcgttcgtggcg
atcgccgggttcggcgcgcatgggttgggcttcgtcgcgcaggcgcgcgccaatggcgcg
gcggcgatcctgttcgaaccgccggcgccggccgaattgccggccccggccgacgcgatc
gcggtgccgggcctgcgcgcgcgcatgggcgcgatggccgaccagttccatggccatccg
tcgcagacgatggccatggtcggggtcaccggcaccaacggcaagacgtccaccgtgcag
ttgctggcgcaggcctggcagtgcctgggcacgcgcagcggcagcatcggcacgctcggc
gtcggcctgtacggcgccgtggtgccgacaggtttcaccaccccgttagtgctgcagacg
catgcgctactggcccagctgcgcgacgccggcgcgcaggcggtggcgatggaagtgagt
tcgcacgcgctggaccagggccgcgtcgatgcggtgcacttcgacgtggcggtgttcacc
aatctcacccgcgatcatctggattaccacggcgacatggccggctacggcgcggccaag
gcgcgcctgttcgccacgccggggctgaaggcggcggtggtcaatctcgacgacgcgttc
ggcggcgacctgctggcgacactggacccggcgctgcgccgcatcggcatcagctcgcgc
ggccaggccggcgccacgctgcgcggcgaagcgctgcgcctggacgcgcgcggcatcggt
ttcgacctgctgatcgacggcgcatgccatccggtgcagtcgccgctgctcggccgcttc
aacgtggacaacctgctggccgtggccggcgtactgcacgcgctggacgtggcgcctgcg
cgcatcgccgcgacgctgtcgcagctgcagccgatccgcgggcgcatgaaccgcctcggc
ggccgcgacgcacagccgctgctggtgatcgactacgcgcataccccggacgcgctggag
caggcgctggacagcctgcgcggccatgcgcacggccgcctgctgtgcgtgttcggctgc
ggtggcgagcgcgacaccggcaagcgcccgcagatggcggcgatcgcgcagcgcctggcc
gacgcggtgatcgtcaccgacgacaatccgcgcggcgaggatggcgatcgcatcgtcgcc
gacatcctggccggcttcaccgacctgcaggcggtgcgcgtgcagcgcgatcgcgcgcag
gccatcgccctggccgtggccgaagccggccccgacgacatcgtactgatcgccggcaag
ggccacgagccgtaccaggacatcgccggcatccagcatccgttcgacgacaccgagatc
gctgcgcaggcgctgcaggcgcgcgctgctggtgtcatggagcgcgcacgatga
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