Xenopus tropicalis (tropical clawed frog): 100036668
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Entry
100036668 CDS
T01011
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
100036668 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xtr01007
]
100036668 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xtr03016
]
100036668 (iars1)
Enzymes [BR:
xtr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
100036668 (iars1)
Amino acid related enzymes [BR:
xtr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
100036668 (iars1)
Transfer RNA biogenesis [BR:
xtr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
100036668 (iars1)
Prokaryotic type
Other AARSs
100036668 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
100036668
NCBI-ProteinID:
NP_001090690
Xenbase:
XB-GENE-1001585
UniProt:
A0JPD6
LinkDB
All DBs
Position
4:124211506..124262797
Genome browser
AA seq
1259 aa
AA seq
DB search
MAQQVPESINFPTEEEKILELWKSLDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVERRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIAEYNKQC
RGIVMRYSQEWEISVTRLGRWIDFKNDYKTLYPWFMETVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVIVTFPLLDDSGVSLVAWTTTPWTLPSNLALCVNP
ELIYVKLKDKSNGNVYILMEARLSALYKAENEYDILERFPGNNLKGKKYKPLFPYFEKAS
ERGAFTVVTDNYVKSEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTK
EVTDFAGQYVKDADKNIIKLLKEHGRLVHSSSYKHNYPFCWRSDTPLIYKAVPSWFVRVE
HMVDKLLQNNSQCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDFEEVVC
VGSLAELEELTGTKVTDLHRESVDHLTIPSRRGKGSLRRVTEVFDCWFESGSMPYAQVHY
PFENRREFEDCFPADFIAEGIDQTRGWFYTLLVLSTALFGQPPFKNVIVNGLVLASDGQK
MSKSKKNYPDPMQVINSYGSDALRLYLINSPVVRAENLRFKEDGVRDVLKDVFLPWYNAY
RFLMQNIYRLHKEENIHFLFNESTKQQSNNIMDQWIISFTQSLVQFFKAEMSAYRLYTVV
PRLVKFVDMLTNWYVRMNRRRLKGESGTEDCQMALETLFSVLFSMCRLMAPFTPFITEMM
YQKLRLLIDPSSMQDKDTKSIHYLMLPTAREDLIDKKIESAVSRMQSVIELGRVIRDRKT
LPVKYPLKEVIVIHQDSEALADIKSLEKYIKEELNVKQVTVSTNKDKYGIRLRAEPDHMV
LGKRLKGAFKTVMAAIKELKSNQLEEFQKTGSIVVDGHELHEEDIRLLYTFDQVSGEDAH
FEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGNLVPTDEITIYYQSLPEGN
YLQSVIERHTDFILATVKSPLKPYPVPPSSNVVIKEKTQLKGSDLEITLVRGSPQPVAGD
SGPACAYVNLRISVNGTEQNGCLLLENPKGDALSKLAELKAAVCNIFHLSPQLSMYCDRT
ELRNDCNLLSLSGKTLHVSSASPAEVSPDGSQLLCQYINLRLLNEERQGTLLLENPIGQN
GLTCSGLFHEVAKVFGLRSRRFRLFLDSALNEELKPGTALSSLNQKTLYVQVLPTTAEC
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacaagtacctgaatcaatcaacttccctactgaagaggagaaaatcctagaa
ctatggaaatctcttgactgtttccaagaatgtttaaagcagtccaaaaaccgcccaaga
tacactttctatgatgggcctccctttgcaacgggtctccctcactatgggcacatcttg
gccggcactattaaggacattgttactagatttgctcaccaaagtggctttcatgtagag
agaagatttggctgggattgccatggattgccagtggaatatgaaattgacaagacgttg
ggaataaagggaccagaggatgtggccaaaatgggcattgctgaatataacaagcagtgt
cgtgggattgtgatgagatattctcaggaatgggagatcagtgtgacaaggctgggccgc
tggattgacttcaaaaatgactacaagacgctctacccatggttcatggagactgtttgg
tgggtgtttaaacagctttatgacaaaggactagtgtatcgaggtgttaaggtcatgcca
ttctctactgcctgcaacactcctctctccaactttgagtcccaccagaactacaaggat
gtccaggatccctctgtcattgtcacctttccattgcttgatgattcaggtgtatcttta
gtggcatggacaacaactccctggaccctgcccagcaacttggccctgtgtgttaaccca
gagctgatctatgttaagttgaaagataaatccaatggaaatgtgtatatactgatggaa
gccaggctgtctgctctgtacaaagctgaaaatgaatatgacattttggaaagatttcct
ggcaataacctcaaaggaaaaaaatacaaaccactgtttccctactttgagaaggcatca
gaaagaggagcatttacagttgtgactgataactatgtgaagtctgaagaaggcacagga
gtggtgcaccaggcaccttactttggagctgatgattacagagtctgtatggatttcaat
atcatccagaaggattcagttcctgtgtgcccagttgatgcatctggctgtttcaccaag
gaagtgactgactttgcaggacagtatgtcaaggatgctgataaaaacatcataaagctg
ctgaaggagcacgggcgattggtgcacagcagctcatacaaacacaactaccctttctgt
tggaggtcagatacacctcttatttacaaggctgttcccagctggtttgtacgagttgaa
cacatggttgataaacttcttcagaacaacagtcagtgttactgggtgcctgagtttgtg
agggagaagcgctttgggaactggctgaaggacgcacgtgactgggccatttccaggaac
cgttactggggaacccccatccctctgtgggtcagcgaggactttgaagaggttgtatgt
gtgggatctctggctgaactggaggaactaactggcacgaaagtcacagatctgcacagg
gagagcgtggatcacctcactattccatcacgccgcgggaaaggttccctgcgacgcgtg
acagaggtgtttgattgctggtttgagagcggtagcatgccttatgcacaggtgcactac
ccatttgagaacaggagagagtttgaagattgtttccctgctgactttattgcggagggt
atcgatcaaaccagggggtggttctacaccctgttggtgctttccactgctctctttggg
cagcctcccttcaagaatgttatagtgaatgggctggtgctggccagcgatgggcaaaag
atgagcaaaagtaagaagaactaccctgacccaatgcaagtgataaacagctacggatcc
gatgcactcaggctgtacctgataaactccccagtggttagagctgaaaacttgcgcttt
aaagaagatggtgtccgggatgtgctcaaagatgtcttccttccctggtacaacgcctac
cgcttcttaatgcagaacatctacaggctgcacaaggaagaaaacattcacttcttattt
aatgagagcaccaagcagcaaagcaacaacatcatggaccagtggataatctcctttact
cagtctttagtgcagttctttaaggctgaaatgtctgcctacagattatacacagtggtc
ccacggcttgttaagtttgttgatatgctcacaaactggtacgtgcgcatgaaccgcaga
cggctaaaaggtgagagtggtacagaagattgccaaatggctctggaaaccttgttcagt
gtccttttctccatgtgcagattaatggctccattcacaccattcatcactgagatgatg
taccaaaaactgagactgttaatagatccgtcttctatgcaggataaggacacaaagagc
atccactatctaatgctgcccacagccagggaggacttgattgacaaaaagattgagagt
gcagtatcacgcatgcagtctgttattgagttaggaagagtcatccgtgaccgtaagacc
cttcctgttaagtacccactgaaggaagtgatagtcatacatcaagactctgaagcccta
gcggatatcaaatctctggaaaaatacattaaagaggaacttaacgttaaacaagttaca
gtttccacgaacaaagacaagtatggaattcggctgagggcagagccagatcacatggta
cttggaaagcggttgaaaggggctttcaaaacagttatggctgcgattaaagaactgaag
agcaatcagttagaagaatttcagaagactggttccatagttgtggatggtcatgagcta
catgaggaggatattagacttctttatacttttgatcaagtgtctggagaagatgctcat
tttgaagctcattctgatgcccaggtactggtcttgctagacgttacaccagaccagtcc
atggtggatgaaggtgtagctagagaagtgattaaccgcatccaaaagctaaggaaaaag
ggaaatttggttccaactgatgagatcaccatttactaccaatcactcccagagggaaat
tacctacagtctgttattgagagacacactgacttcattctagccaccgtcaagtctcct
ctgaaaccttacccagtgccgccatctagcaatgtcgttataaaggagaagacacagctg
aaagggtctgatttagaaattactctggtcagagggtcgccacagcctgttgctggagat
tctggtcctgcctgtgcctatgtcaatctgagaatatctgtaaatggcacagaacaaaat
ggttgcctactactagagaatcctaaaggtgatgcattatctaaactggctgagctaaaa
gctgctgtctgcaacatattccacctgagcccccaacttagcatgtactgtgacagaaca
gagctccggaatgactgcaaccttttaagtcttagtgggaaaaccctgcatgtttcttct
gcatcacctgcagaggtatctcctgatggaagccagctgctgtgtcagtatatcaatctt
aggctattaaatgaagagaggcaaggaacactactgctggaaaaccctattggtcagaat
ggtctgacgtgctctggtttgttccatgaagtagctaaagttttcgggcttagaagcaga
cggtttagattgtttttagactcggcactaaatgaagagttgaagccgggtacagctctg
tcaagccttaatcagaagaccctttacgtgcaggtccttcctactacagctgagtgttag
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integrated database retrieval system
