Xenopus tropicalis (tropical clawed frog): 100037905
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Entry
100037905 CDS
T01011
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X6
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04270
Vascular smooth muscle contraction
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100037905 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
100037905 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100037905 (arhgef1)
Membrane trafficking [BR:
xtr04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100037905 (arhgef1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100037905
NCBI-ProteinID:
XP_004916301
Xenbase:
XB-GENE-1009790
UniProt:
A0A8J0R5T2
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All DBs
Position
7:106736732..106787135
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AA seq
1063 aa
AA seq
DB search
MTHSVYLLPSCMSYCGFQKHGSQVSPGLCITYASADLSRGFPLSHSLGFCQTTPKPLVCQ
IRSMDPDDGHFGGLYSKGSMSIIGAEDEDFENDIEPNMVDESSYFRSIELVKEHPAYIMV
FLQHVVLQFDPSPLLCFLHAEMLKNLSAKELKKVFMDFHYTFLMKGAVLHVSVPNSVSFE
LDRTRPEMIPEETQRKYVKDIQKHQTEAISQQLEDFRAKRVLGMTPGELELSELESYRTN
DRSILEAKEKQLAEQLLARLDEMHLTIAPDEEKSSAIFCAIVAYMKHLGVKTKAADSKKS
KGIFFRKKVSTNKKDEPLKTKKTFSILDPMRWNRNDSHYVDSRPSKVEPEAEKPNPDRRV
SQGQRTFDRSDSSTAKSKNSEGPDSVVSVNIIPPPNEPNDPDPAVTDGALSNDASEVLKG
SPTTEHCPADQTEESAENESPEPGGSSEGPLPFLLPQSEETEPRVQEAESDPPNWRELVP
PEILLRLKKSEIKRQEVINELFFTEHAHVRMLRVLHDVFYIPMQNGWIPTLELENIFPSL
DDLIEAHAVFLDTLKRLRLENNSVIQEIGTILLNRFDGTEGNWFQKISSRFCSRQPFALE
QLKAKQKRDPRFTQFIQEAESSPHCRRLQLKDIIPFEMQRLTKYPLLLQNIANLTEEDEE
KQRVQRAAESCRQILNHVNQEVREMENKMKLTDYQRRLDVSNLRQINDPLFNEFKNIDIS
KKNLIHEGSLTWKVSRDKAFDVHVLLLDDLLMLLLKQDERLVLKCQSRTIIPAPDGKLML
SPIIKLNMAMVREVATDKNAFFVIFNWEDRAQFYELVAPTPAEKKNWFLLISNTTGLLEP
PASSKQRHRSITPGTMPQSPSDFADQLLSSSENGGSLKDSVSKDEKEESVEDALEGQEEK
DFSGLTEYLLASNIDLNQDAASGGGNVASEALEEVSVLKRLLVRNIRLSVDADTLSTLET
WSAGEEPALEASEQGRASNGDREAEDSEMESTQQGENGRKQSSADVSESLCAPIVLSKEQ
SEEVKRHILSLEQRIQQLKLIEEDYNNLHRTIAKFTVPRSSFT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgactcactctgtctacctcttaccctcctgcatgagttattgtggattccaaaagcac
ggctcacaggtttctcctggtctgtgcatcacttatgcatcagccgacctgagcagggga
ttcccattgtctcactcactgggtttttgccagactactcccaaacccctcgtctgccag
ataagaagcatggatccggacgatggccattttgggggtttgtactccaaggggtccatg
tcgatcattggagcagaggatgaggattttgagaatgacattgaaccgaatatggttgat
gagagcagttacttccgaagcattgagctagtgaaagaacacccggcctacattatggtg
ttcttgcagcacgtggttcttcagtttgaccccagcccactgctctgtttcctgcatgcg
gagatgctaaagaacctttcagccaaagagcttaagaaagtcttcatggattttcactac
acatttctgatgaaaggagcggtactgcatgtcagtgtgccaaacagcgtatcctttgaa
ctggatcggacaaggcctgagatgatcccagaagaaacccagagaaaatatgtcaaagac
attcagaagcaccaaactgaggccatttcccaacagctggaggactttagggccaagcga
gtacttggtatgacccctggggaactggagctgagcgagcttgaatcctatcgaaccaac
gaccgcagtatcctggaagccaaagagaagcagttggcagagcagctcctggcacggctg
gatgagatgcacctaactattgctccagacgaggaaaaaagctctgccatcttttgtgcc
attgtagcctacatgaagcacctgggggtgaagaccaaggcggcggatagcaaaaaatct
aaaggaatcttcttcaggaaaaaggtttctacaaataaaaaggatgagcctctgaaaaca
aagaaaacattcagcatcttggatcctatgcgctggaaccgaaatgattctcactatgtt
gacagcagaccatccaaagttgagcccgaagctgagaagccaaacccggacagaagggtc
agccaggggcagagaacttttgataggagtgacagcagcacagcgaaatccaagaacagc
gaagggcctgattctgtggtgtctgtaaatatcatcccccctcctaatgagcccaatgat
cctgacccagcagtgactgatggggcattgtctaatgatgcatctgaggtcctcaaagga
tcccccaccactgagcattgcccagcagaccagactgaggaaagtgcagaaaatgaaagc
ccagagcctggagggagttcagagggcccgctgccctttctgcttccccagtctgaggag
actgagccgcgcgttcaggaggccgagagcgaccccccaaactggagggagctcgtcccc
cctgaaatactcctcaggctgaagaaaagcgaaatcaagcggcaagaggtcatcaatgag
ctcttctttacagagcacgctcatgtacggatgcttcgtgtgttgcatgatgtcttctac
atccccatgcagaatggatggatccccaccttggagctggagaacatctttcctagcctg
gatgaccttatcgaggctcatgctgtattcctggacaccttgaagcgtctgcgccttgag
aataactcagtgatccaggaaataggcaccatcttgctgaaccggtttgacggcacagag
ggcaactggtttcagaagatttcatctcggttctgcagccggcagccatttgccttggaa
cagttgaaagcgaaacagaagagagaccctcgatttacgcagtttattcaggaagctgag
agcagccctcactgccggcggttacaactaaaggacattataccatttgagatgcaaagg
ctgaccaagtacccgttgctgctgcagaacatcgcaaatctaactgaggaagacgaggag
aagcagagagtgcagagggcagcagagtcttgcaggcagatcctaaaccatgttaaccag
gaggtgcgcgagatggagaataagatgaaacttacagattaccaaagacgcctggatgtt
tccaacctgaggcaaatcaacgaccccttatttaatgaatttaagaacattgatatcagc
aaaaagaatttgatacatgaaggatctttgacatggaaagtgagcagggacaaggctttt
gatgtccatgtcctcctcctggatgatctcttgatgctgctgctgaaacaagatgagcgg
ctggtactgaagtgccagagtcggactattattcctgctccagacgggaagctcatgctg
agcccaatcatcaagctgaatatggccatggtcagagaggtggctacagataagaatgcc
ttttttgtgattttcaactgggaggatcgagcacagttctatgaacttgtggctccaaca
cccgctgagaagaaaaactggtttttactgatcagcaacactacaggcttattggaaccc
ccagcttcttccaaacagagacacagatctatcactcctggcacaatgccgcagagcccc
tccgactttgcagatcagctgctgagcagctcagaaaatggaggctccctgaaagattca
gtatccaaagatgaaaaggaagagtcggtggaggatgcattggagggtcaggaagagaag
gacttcagcggccttacagaatacctccttgccagcaacattgatctgaaccaagatgca
gcatctggaggaggcaatgttgccagcgaggccttggaagaagtgtcggtgctaaaacgc
ctgctagtgcgcaatatccgcctcagtgtggatgcagacacgctctcaaccctggagacc
tggtcagcgggggaagaacctgcactggaggcttctgaacagggaagggcctccaatggg
gatcgagaggcagaggattctgaaatggaatctacacaacagggagagaatggcagaaag
cagagttctgcagatgtttcagagtccctgtgcgcacccattgtactgtccaaagaacag
tcggaggaggtgaagaggcacattctgtcactggagcagaggatccagcagcttaagctg
atcgaggaagattacaacaacctgcacagaacaatcgccaaattcactgtaccgaggagc
agctttacatga
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integrated database retrieval system
