Xenopus tropicalis (tropical clawed frog): 100038176
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Entry
100038176 CDS
T01011
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03250
Viral life cycle - HIV-1
xtr03260
Virion - Human immunodeficiency virus
xtr04020
Calcium signaling pathway
xtr04060
Cytokine-cytokine receptor interaction
xtr04144
Endocytosis
xtr04672
Intestinal immune network for IgA production
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100038176 (cxcr4)
03260 Virion - Human immunodeficiency virus
100038176 (cxcr4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100038176 (cxcr4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100038176 (cxcr4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100038176 (cxcr4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100038176 (cxcr4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100038176 (cxcr4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xtr04030
]
100038176 (cxcr4)
04050 Cytokine receptors [BR:
xtr04050
]
100038176 (cxcr4)
04090 CD molecules [BR:
xtr04090
]
100038176 (cxcr4)
G protein-coupled receptors [BR:
xtr04030
]
Rhodopsin family
Chemokine
CXC Chemokine
100038176 (cxcr4)
Cytokine receptors [BR:
xtr04050
]
Chemokine receptors
CXC Chemokine
100038176 (cxcr4)
CD molecules [BR:
xtr04090
]
Proteins
100038176 (cxcr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
CXCR4_N
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
100038176
NCBI-ProteinID:
NP_001090831
Xenbase:
XB-GENE-489917
UniProt:
Q07FZ4
LinkDB
All DBs
Position
9:81968637..81972490
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AA seq
358 aa
AA seq
DB search
MDGFSGGIDINIFDSNSTENGSGDFEDFSEPCFMHDNSDFNRIFLPTIYSFIFLLGIIGN
GLVVVVMGYQKKSRTMTDKYRLHLSVADLLFVFTLPFWSVDAAIGWYFKEFLCKAVHVIY
TVNLYSSVLILAFISLDRYLAIVHATNSQGSRKMLADKVVYAGVWLPALLLTVPDLVFAR
VSDENGQFVCDRIYPIDNRETWTVGFRFLHITVGLILPGLIILICYCVIISKLSHSKGHQ
KRKALKTTVILILAFFACWLPYYVCLTTDTFMLLGLLKADCIWENTLHKAISITEALAFF
HCCLNPILYAFLGAKFKTSAQNAFTSVSRGSSLKILSKKRAGLSSVSTESESSSFHSS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggacgggttttccggtggcatcgatatcaatatatttgacagcaactccacggagaat
ggttccggggactttgaggatttcagtgagccgtgcttcatgcacgacaacagcgacttt
aaccggatcttcttgcccacgatctactccttcattttcctgctgggcatcatcgggaat
ggactggtggtggtggtcatgggctatcaaaagaaatccaggaccatgacggacaaatac
cggctgcacctttcggtggccgacctgctttttgtgttcaccctgcccttctggtctgtg
gatgctgccattggatggtactttaaggagttcctctgcaaggcggtccatgtcatttat
actgtcaacctgtacagcagcgttctgattctggcgttcatcagcctcgaccgctacttg
gcgattgtccatgccaccaacagccaaggctcgaggaagatgctggccgacaaagtggtg
tacgccggcgtgtggcttccagcccttctgctgacggtgcccgacttggtgtttgctcgg
gtcagcgatgaaaatgggcagttcgtgtgcgaccgcatttaccccatcgacaaccgggag
acttggactgttgggtttaggttcctgcacatcacggttggacttatcttgcctggtctg
atcattctgatctgttactgtgtcatcatatcaaagctttcccactccaagggccaccag
aagcgcaaagccttaaagaccaccgtcatcctcatcttggccttcttcgcctgttggctt
ccttactatgtctgcctcactaccgacacattcatgttgcttgggctgttgaaggccgac
tgtatttgggagaacaccctacacaaagccatatccatcacggaggccttggccttcttc
cactgctgcctcaaccccatcctctacgccttccttggggccaaattcaagacctccgct
cagaatgccttcacatcggtcagcaggggctcaagcttaaaaatattgtccaaaaagcga
gccggactttcttctgtctcaacagaatccgaatcctccagtttccactccagctaa
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