Xenopus tropicalis (tropical clawed frog): 100038202
Help
Entry
100038202 CDS
T01011
Symbol
pdgfa
Name
(RefSeq) platelet-derived growth factor subunit A precursor
KO
K04359
platelet-derived growth factor subunit A
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
xtr04510
Focal adhesion
xtr04540
Gap junction
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100038202 (pdgfa)
04020 Calcium signaling pathway
100038202 (pdgfa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100038202 (pdgfa)
04540 Gap junction
100038202 (pdgfa)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100038202 (pdgfa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100038202 (pdgfa)
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100038202 (pdgfa)
Cytokines and neuropeptides [BR:
xtr04052
]
Cytokines
Growth factors (RTK binding)
100038202 (pdgfa)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Growth factors/receptors
100038202 (pdgfa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
100038202
NCBI-ProteinID:
NP_001163968
Xenbase:
XB-GENE-484495
UniProt:
B0BM23
LinkDB
All DBs
Position
9:complement(27858237..27899268)
Genome browser
AA seq
219 aa
AA seq
DB search
MRIWAWILLLSVCCYLSPSLGEEAEIPQELIERLAHSEIRSISDLQRLLDIDSVGGGEDA
SGANIRSQTRDFRHNRLVPEKRSVPSRRKRSVEEAVPAICKTRTVIYEIPRSKIDSTSAN
FLIWPPCVEVKRCTGCCNTSSVKCQPSRIHHRSVKVAKVEYVRKKPKLKEVLVQLEEHLE
CTCTANSNSDYREEETERQEKKNLFKRHSVRTKEQCTFL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaggatctgggcttggattctgctgctaagcgtctgctgctacctgtctccttcattg
ggcgaggaagcagagatcccccaggagctgatcgagaggctggctcacagcgaaatccgc
agcatcagcgacctgcagcgtctcctggacattgattccgtaggaggaggcgaggatgct
tctggagccaacataagatcacaaacacgcgactttcgccataataggcttgtgccagag
aagcgttctgttcccagtcgcagaaaaagaagtgttgaagaagcagttcctgctatctgt
aaaacaagaactgttatatacgagatacctcgtagcaaaattgattcgacatctgccaat
tttctaatctggcctccgtgtgtggaggtgaaacgatgtacgggatgctgcaacaccagc
agtgtcaagtgccagccatcaaggatacaccacaggagtgtcaaggtggcaaaagtagaa
tatgtaagaaagaaacccaaattaaaagaagttcttgtgcagttagaggaacatctggaa
tgcacgtgtacagcaaactctaattcagattatcgagaagaagaaaccgaaagacaggaa
aaaaaaaacttgttcaaacgacactctgtgagaacaaaggaacaatgtacatttctttaa
DBGET
integrated database retrieval system
