KEGG   Xenopus tropicalis (tropical clawed frog): 100127871
Entry
100127871         CDS       T01011                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100127871 (ercc6l2)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    100127871 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C VIGSSK HDA2-3 DEAD ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 100127871
NCBI-ProteinID: NP_001362231
Xenbase: XB-GENE-952480
UniProt: A0A8J0QFY3
LinkDB
Position
1:136010400..136073657
AA seq 1397 aa
MDSGRDDQDVWHNEEKCLAPYSENGELCEAVIKSISCGANGLSYAVISFLDSTQKKVPLS
EIQKPPSYNSSWNTSMFDDEDLEKPFFPDRRPHGPLENFPLSNTAVSVPYTINRYLRDYQ
RDGITFLYKHFSRSVGCILGDDMGLGKTIQVIAFLAAILGKKGTREDIENNMPEFLLRTV
KKVCSSSSPKKVFLIVSPLSVLYNWKDELETWGYFRLTLIHGNKKDSEISRLKQGKFEIA
LTTYETLRLCLDEINSIDWSAVVVDEVHRIKNPKARVTQVMKEIRCKVRIGLTGTILQNN
MEELWCVMDWAVPGYLGSSSQFKEKFSNPVEYGQRHNATKRELATGRKAIQTLANKLSPF
FLRRTKALISQQLPKKEDRIIFCSLSEFQKAVYQTVLETQDVNLVLQGGEPCSCKSGRKR
RKCCYKENMFGESVRTLYFSYLAILRKVANHAALLQTDTSTSKKQEAHIKRVCNEVFSKF
PEFVRQSKDAAFETLSNPRYSGKMKVLQQLLNHCRKNKDKVLLFSFSTKLLDVLERYSMA
SGLDYRRLDGNTKAEERMKIVKEFNTMQDVNICLVSTMAGGLGLNFIGANVVVVFDPTWN
PANDLQAIDRAYRIGQCRDVKVFRFVSLGTVEEMIYLRQVYKQQLQCAVVGSENAKRYFE
AVQGSKEHKGELFGVNNLFKLRPQGSCLTRDILEREKQVEDGVTSASMYVSQTPVTVDTE
MGADIDSDDPKVGAKHCQRFFKESTFDFSSDSDEETNGTSVMKPSKMPSNSDNRRQLTLH
QYGFSKMLEREITTDNKKTSLPGESNTSILNVNMSSGKKSSRTVLENENVVSETEYSSDE
SGEDIVLSTQVCKQDKGKKISIIKCIAESDSSDIDLDTSDNTNRQPVNSSCDDISDESDD
IEIPNKYRSGNTGKLKDSFNNKYDAAKDSQTIEVFTSSDDDNLQIKKSSPSYEDTPQKSS
NLRMHMESRKRKNKSVFQIKKAITHQEGVKYNGSSLDKVLDGVEGVAYIHSNQHVVGSSK
AENQLSRWAVRDVFELKQFSQLPANITPLKITKSEYVSDKMTPLRKTEKDLETKSYPMLQ
YPVTHQQKKVHRVGKTTFLVGETPKALQRKQFQEMAAHFNMASAEQFAHHISSVKSDVRQ
NMLREYYISKYSEAGELYPVQAQLELQEDKEHKTKEQGKLATKRRQKGMNAFPDETTEKR
IKAQHNKKIRKNSEPIGIDSHGCEHSSNLNMPIIISHTGNPQIYSTYESTSTLKITDSHE
NQSSSTVSPISSSKLMMDNMNKTGENGSISELLGDTSILDDLFTNKTNRQTQLPVRPNCD
PAATKAKHRPKDFWDLLNEQNNESLNKLTDLSVIEKVCESPTLPSTTKKDHWDDSLWINN
EKFLWRKNDSMHNSSTS
NT seq 4194 nt   +upstreamnt  +downstreamnt
atggattctggaagagatgaccaagatgtgtggcataacgaagaaaagtgcctggctcct
tattcagaaaatggcgagctctgtgaagctgtgataaagtccatcagttgtggtgctaat
ggtttatcttatgccgttatttcatttttggattctacccaaaagaaagtgccactttca
gagatccaaaaaccaccatcctataacagctcctggaatacatccatgtttgatgatgaa
gacttggaaaaaccttttttcccagacaggagaccccatggacctctggaaaattttcca
ttgtcaaatactgcagtttctgttccttatacaatcaatagatatttacgtgattaccag
agggatgggataacattcttgtataaacatttctctcggtctgtgggatgtatccttggt
gatgacatgggacttggaaagacaatacaggttatagcatttctggctgccattcttggc
aagaagggaacacgtgaagatattgaaaacaatatgcctgaatttttattgcgaactgta
aagaaagtctgcagttcttcatcccctaaaaaggtttttttgatcgtttcaccactatct
gtactgtacaattggaaggatgagctggaaacctggggatacttcaggttaacattgatt
catggaaacaaaaaggattctgagatttctcgcctcaaacagggaaaatttgaaattgct
ctaactacttatgagactcttcgattgtgtttagatgaaattaacagcattgactggtca
gctgtggttgttgatgaagtgcatagaattaagaatccaaaggccagagtaacacaggtc
atgaaagaaatacggtgcaaagttcgtattggtcttacaggaactattttacagaacaat
atggaggagctgtggtgtgttatggactgggctgttcctggatatttgggtagcagcagc
caattcaaagaaaaattttcaaaccctgtagagtatggacaaaggcataacgctactaag
cgagaattagctactggaagaaaagctattcaaacactagcaaacaaattgtcaccattt
ttcctgagacgtactaaggcacttataagccaacagttacctaaaaaagaagaccggatt
attttctgttctctatcagagtttcagaaagctgtttaccaaacagtattagaaactcaa
gatgttaacctggtcttacaaggaggggagccttgcagctgtaaaagtggtcgaaaaaga
aggaaatgctgctacaaagaaaatatgtttggtgaaagtgtgaggactctttattttagc
tacttggctatcctacgtaaagttgcaaatcatgctgctcttttacagacggacactagc
accagcaaaaaacaggaagctcatattaaaagagtttgcaacgaagtgttttccaagttt
ccagagtttgtccggcaaagcaaggatgctgcatttgaaactctctctaatcccagatat
agtggaaaaatgaaggtccttcagcagcttttaaatcattgcagaaaaaacaaggataaa
gttcttcttttctccttttccacaaagttgcttgatgttttggaaagatatagtatggcc
tcagggttggactatagaaggcttgatggaaatacaaaggcagaagaaagaatgaaaatt
gtgaaggaattcaacactatgcaagatgtaaacatttgcctagtttctactatggctgga
ggtctaggactcaattttattggagctaatgttgtggtggtctttgatcccacatggaat
ccagccaatgatctgcaggctattgacagggcatatagaattggacaatgcagggatgtg
aaagtttttaggttcgtgtccttggggacagtggaagaaatgatatatttaagacaagtt
tacaaacagcaacttcagtgtgcagtggttggaagtgagaatgcaaagcgctattttgag
gcagtgcaaggttccaaggagcataaaggagagctgtttggtgtcaataatttgttcaaa
ctaagaccacaaggaagctgccttaccagggatatattggagcgcgaaaaacaggtggaa
gatggagtaacaagtgcttccatgtatgtaagtcagacacctgtgacagttgacacagaa
atgggtgcagatattgatagcgatgaccctaaagtgggagccaaacattgtcaacggttt
ttcaaagaatccacctttgattttagcagtgatagtgatgaagaaacaaatggaacatca
gtaatgaaacccagtaaaatgccgtccaattctgataataggagacagcttacattacat
caatatggattttcaaaaatgctggaaagagaaattacaactgataacaagaaaacctcc
cttcctggagaaagtaatacatctatattaaatgtaaatatgagttctggaaaaaagtct
tcacgcacggttttggaaaatgagaatgttgtctctgaaacagaatacagctctgatgag
agtggcgaggatattgtcttgtccacccaagtatgcaaacaggataaggggaaaaaaata
tctataataaaatgcattgcagaatcagactcttcagatattgatttagacacatctgat
aacactaataggcaacctgtaaatagtagctgtgatgatatcagcgatgaatctgatgac
attgaaataccaaataaatacagatctggtaacactgggaaattaaaagactcttttaat
aacaaatatgatgcagctaaagattctcagacaatagaagtgtttacatcctctgatgat
gacaatttgcaaattaaaaaatcaagtcctagttatgaagataccccacaaaaatcatca
aatttaagaatgcatatggaatcgagaaaaagaaaaaacaaatcagtgtttcaaataaag
aaagccataacacaccaagaaggtgttaaatataatggaagttctttggataaagttcta
gatggagttgaaggtgtagcatatatccactcaaatcagcacgttgtgggttcaagcaaa
gcagaaaatcagctgagcaggtgggctgtacgtgatgtttttgaattaaaacaattctcc
cagcttccagccaatattacacctcttaaaattacgaaatctgaatatgtttctgataag
atgacaccactgagaaaaaccgagaaagacttggaaacaaaaagttaccctatgttgcag
tatcctgtaacacaccaacaaaagaaggtacatcgagtagggaaaacaactttcctggtt
ggggagactcccaaggcattgcagaggaaacaatttcaggaaatggcggcacactttaac
atggcttcagcagaacagtttgctcatcacatctccagtgtaaaatctgatgtccgacag
aacatgctccgtgaatattacatcagcaaatattctgaagctggagagctatatcctgta
caagcacagttagagttacaagaggataaagagcacaaaacaaaggaacagggtaaactg
gctacaaaaagaagacaaaagggcatgaatgcatttccagatgaaaccactgaaaagagg
ataaaagcacagcataataaaaaaattagaaaaaacagtgaaccaattgggattgacagc
catggctgtgaacattctagcaatttgaacatgcccattataatatcccatacaggaaac
ccccaaatatattccacatatgagtcaaccagtaccctgaaaatcactgattcacatgaa
aatcaatctagtagtactgtaagtcctatctccagtagcaagttaatgatggacaatatg
aataaaacaggtgagaacggctccatctcagagctgctcggagacacgtccattctggat
gatttgtttaccaacaaaacgaatcgccaaacacagttaccagttagaccaaactgtgat
ccagcagcaacaaaagcaaaacaccgtcccaaagatttttgggatttattaaatgaacaa
aataacgaaagcctaaataagctcactgatttgagtgtgatagaaaaggtctgtgagagt
ccaaccttaccttcaacaaccaagaaagatcattgggatgattcgctgtggataaacaat
gagaagtttttatggcgaaaaaacgattcaatgcataattctagtacgtcttaa

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