KEGG   Xenopus tropicalis (tropical clawed frog): 100134991
Entry
100134991         CDS       T01011                                 
Symbol
tnf
Name
(RefSeq) tumor necrosis factor
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010  MAPK signaling pathway
xtr04060  Cytokine-cytokine receptor interaction
xtr04150  mTOR signaling pathway
xtr04210  Apoptosis
xtr04217  Necroptosis
xtr04350  TGF-beta signaling pathway
xtr04620  Toll-like receptor signaling pathway
xtr04621  NOD-like receptor signaling pathway
xtr04622  RIG-I-like receptor signaling pathway
xtr04625  C-type lectin receptor signaling pathway
xtr04920  Adipocytokine signaling pathway
xtr05132  Salmonella infection
xtr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    100134991 (tnf)
   04350 TGF-beta signaling pathway
    100134991 (tnf)
   04150 mTOR signaling pathway
    100134991 (tnf)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100134991 (tnf)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    100134991 (tnf)
   04217 Necroptosis
    100134991 (tnf)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    100134991 (tnf)
   04621 NOD-like receptor signaling pathway
    100134991 (tnf)
   04622 RIG-I-like receptor signaling pathway
    100134991 (tnf)
   04625 C-type lectin receptor signaling pathway
    100134991 (tnf)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100134991 (tnf)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    100134991 (tnf)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100134991 (tnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:xtr04052]
    100134991 (tnf)
   00536 Glycosaminoglycan binding proteins [BR:xtr00536]
    100134991 (tnf)
Cytokines and neuropeptides [BR:xtr04052]
 Cytokines
  Tumor necrosis fators
   100134991 (tnf)
Glycosaminoglycan binding proteins [BR:xtr00536]
 Heparan sulfate / Heparin
  Cytokines
   100134991 (tnf)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 100134991
NCBI-ProteinID: NP_001107143
Xenbase: XB-GENE-480131
UniProt: F6VTQ3
LinkDB
Position
8:complement(74458891..74461707)
AA seq 227 aa
MNTVESQMENGLLIVRHERSNRDSTWRCVSICAFLLLLGSTILFALLHFQIIPNFANKDE
SKMPEILAIKTYLESVPVARAQARKGDKLAAHFTGAKENDKLVWNKYDPDSSIAEKMLKD
NSIVIPENGLYFVYTQVSFTGPDCQRDPLHLTHTVNIKPESYPKNDPILTSMKTVCEVRS
GSAWFQSIYEGGIFNLEKGSVISTETEHTELLDDDKESKIYLGILAV
NT seq 684 nt   +upstreamnt  +downstreamnt
atgaatactgtagagtctcagatggagaacgggctcctaattgtaaggcacgaaagaagc
aatagggattccacctggcgctgtgtcagtatctgtgcattcctgttattactgggatcc
accatcctctttgctctgctgcattttcagatcatcccaaactttgccaacaaggatgag
agtaagatgccagaaatattggctatcaagacttatttagaatctgtaccagtagccaga
gcccaagcaagaaaaggggacaaactggcagctcattttacaggtgctaaagaaaatgac
aaattagtttggaacaaatatgaccctgattcatctattgctgagaaaatgcttaaggat
aactccatcgttattccagaaaatggtctctactttgtgtacacccaggtgtccttcaca
ggtcctgactgccaaagggatcctctacacctcacccacacagtcaacataaaaccggag
tcatacccaaaaaatgatccaatcctcacttctatgaaaacagtctgtgaggtgcgttca
ggttctgcctggtttcagtccatctatgaaggggggatctttaatcttgaaaagggctct
gttatctcaactgaaacagaacatactgaacttcttgatgatgataaagaaagtaaaatc
tacctgggcatccttgctgtgtga

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