Xenopus tropicalis (tropical clawed frog): 100135349
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Entry
100135349 CDS
T01011
Name
(RefSeq) Ig mu chain C region membrane-bound form
KO
K06856
immunoglobulin heavy chain
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04145
Phagosome
xtr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
100135349
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100135349
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100135349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100135349
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Opsonins
100135349
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
ig
Ig_3
Ig_2
I-set
PTCRA
Motif
Other DBs
NCBI-GeneID:
100135349
NCBI-ProteinID:
XP_017945116
Xenbase:
XB-GENE-5798884
UniProt:
A0A8J0SXH1
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All DBs
Position
1:complement(140572307..140582662)
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AA seq
485 aa
AA seq
DB search
MLVSLFLVTASAPSVFPLIPCCGNVDFENSVTMGCLVTGYMADPLEIQWNDGSITTGIKT
MGPVLSAADGLYTLSSQLTILASEWKNTTYRCKVVHNSTNTKQEKSLKVLPCIEPHVQIF
LQPPCMSDVAPDTKPQKINATLDLVCIIKNFYHEQIKLKWLMNGKQDLSAEASVPNPIKT
EDGTYSASSQLRILKGMWNKGMQYSCVVTHPSSNTTTIANITKCTEECYDNLQVHPLPPT
FHDLYFSRIAKITCLVSSMKTTENFNIAWEREKEGKLEFVTEDPVLHDNGTYSVVSVLSV
CAEDWESREKFSCTVRSQDLPSPVKKTIFKQNEGTPKAPDVYLLPPSPQEILQQEVATIT
CYIKGFYPKEIFVQWMQGSASISEDKFVNTVAMKNDDEQTYFLYSKLTIPAAHWNQGNTY
TCIVGHEALPLYITQQSIDKSSVFLRGNECIEEMENNWFTATVFMVLFILSLFYNVTITA
FKVKE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtttctctgtttctagttacagcatcagccccctcagtctttcctcttattccc
tgctgtggcaatgttgactttgagaactcagtgacaatgggctgcttggtgactggctac
atggcagatccattagaaattcaatggaatgatggtagtattacaactgggatcaagact
atggggcctgtgctcagtgcagctgatggactttacaccttgagcagccagcttaccatc
ttagcctcagaatggaagaacacaacatacagatgtaaagtagtgcacaattctaccaat
acaaaacaggagaagtctttaaaagtgttaccctgtatagagcctcatgtccagatattt
ctgcagccaccatgcatgagtgacgtggctcctgatacaaaacctcagaaaataaatgct
acattggatcttgtgtgtataattaagaacttctaccatgagcaaattaaacttaagtgg
ctgatgaatgggaaacaagatttaagtgcagaagcatcagtgccaaaccctataaagaca
gaggacggtacctacagtgccagcagccaactgcgtattctaaaagggatgtggaacaag
ggcatgcagtactcctgtgttgtcactcatccttcctctaatacaactaccatagcaaat
atcaccaagtgcacagaagaatgctatgacaacctccaagtgcatcctctcccacccacc
tttcatgacctttactttagtcggattgctaagattacctgccttgtgagcagcatgaaa
accacagaaaactttaacattgcttgggaaagagagaaagagggaaaactagagtttgtc
actgaggatcctgttctccatgacaatgggacctatagcgttgtcagtgtcctaagtgtt
tgtgctgaggattgggaaagtagggaaaagttctcatgcactgtaagaagccaggatttg
ccatcaccagttaagaaaacaatcttcaaacagaatgaaggaactccaaaagctccagat
gtctatttacttccaccatcccctcaagaaattttacagcaggaggtggctacaattacc
tgttatatcaaaggcttttaccccaaagaaatcttcgtacaatggatgcaaggaagtgca
agcatcagtgaagacaaatttgtaaatactgttgctatgaagaatgatgacgagcaaaca
tactttttatatagcaagctgaccatcccagcagcccactggaatcaaggaaatacatac
acctgcattgttgggcatgaagctctacccctgtacatcacacagcaaagcattgataag
tcaagcgtatttctgcggggaaatgagtgcatagaagagatggaaaacaactggtttaca
gctactgtcttcatggtcctattcattctaagtctcttttataatgtgactatcacagcg
ttcaaggttaaggaatga
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