Xenopus tropicalis (tropical clawed frog): 100145048
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Entry
100145048 CDS
T01011
Symbol
hacd1
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00062
Fatty acid elongation
xtr01040
Biosynthesis of unsaturated fatty acids
xtr01100
Metabolic pathways
xtr01212
Fatty acid metabolism
Module
xtr_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
100145048 (hacd1)
01040 Biosynthesis of unsaturated fatty acids
100145048 (hacd1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xtr01004
]
100145048 (hacd1)
Enzymes [BR:
xtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
100145048 (hacd1)
Lipid biosynthesis proteins [BR:
xtr01004
]
Fatty acid synthase
Component type
100145048 (hacd1)
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
SpecificRecomb
Motif
Other DBs
NCBI-GeneID:
100145048
NCBI-ProteinID:
XP_002939049
Xenbase:
XB-GENE-957000
UniProt:
A0A803K0M2
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Position
6:28414263..28448674
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AA seq
240 aa
AA seq
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MASSDDEGSVEEKEHTKKKIGPLATAWLTFYNIAMTAGWLVLAIAMIRFYAEKGTHKGLY
RNIQKTLKFFQTFALLELVHCALGIVHTSVLVTGVQVSSRIFMVWFITSSIKQVQSEHGV
LIFLVVWTVTEITRYSYYTFKLLNHLPYFIKWARYNLFIVLYPVGVVGELLTIYAALPHV
RKSAMYSLRLPNKYNVSFDYYYFLIIAMCSYIPLFPQLYFHMLRQRRRVLHGEVIVEKDD
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaagcgatgatgaaggttctgtggaagagaaggaacataccaagaaaaagatc
ggtcctttggccacagcatggctcaccttttacaacattgccatgacagctggatggctt
gttcttgccatagccatgatccgattttatgcggaaaaaggaacacacaagggtctgtat
agaaatatacagaagacacttaaatttttccagacatttgctttacttgagctggtccac
tgtgcactgggaatagtgcacacatcggtgctagtaacaggggtccaagtcagttcaagg
atcttcatggtctggtttattacaagcagtataaaacaggtccagagtgaacacggcgtt
cttatttttcttgtcgtatggactgtgacagagatcacgcgatattcctactacacattc
aaacttctcaaccacttgccatacttcattaaatgggccaggtataatttatttattgtt
ttgtatcctgttggcgttgtgggggaactgctaactatttatgctgctctgccccacgtg
cggaagagtgcaatgtattctctgagacttcccaacaagtacaacgtctctttcgactac
tactacttcctgatcatcgcaatgtgttcttatataccactgtttccccaactgtacttc
cacatgctgcgccagaggaggagagttctgcacggagaagtcatcgtggaaaaggacgac
tga
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