Xenopus tropicalis (tropical clawed frog): 100145309
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Entry
100145309 CDS
T01011
Symbol
fkrp
Name
(RefSeq) fukutin-related protein
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00515
Mannose type O-glycan biosynthesis
xtr01100
Metabolic pathways
Module
xtr_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
100145309 (fkrp)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100145309 (fkrp)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100145309 (fkrp)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
100145309 (fkrp)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
100145309 (fkrp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
100145309
NCBI-ProteinID:
NP_001120257
Xenbase:
XB-GENE-964270
UniProt:
B1H170
LinkDB
All DBs
Position
8:complement(70249670..70256845)
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AA seq
484 aa
AA seq
DB search
MRCPLCHILISLTLLCNILLLYYTWHLQFRSSGRQTPLSALSPGITVIVREFQEFENGLA
ELNHSFLRARPSLRILIASNTPPYPPVQGLHILRLHPSPEQSSSSLRLESHIHTRLVALV
PDGTSLDPPDLLDRMARELRDASPGVKIIAAAAGQEIQCLYLNVSMKQWTAVYRPATAKE
TCTAVVGTAVLLLRSRDLFELPFPLIRPLQLALFIQTALRGWGVQVLKDASFPRTTMPAT
DHGRWKAEQAEKKEEAQTMRALNVRLVKGLVGGDRWFGCSKDTQRCFGTVVEGTPQYLYN
NQWTPPCCLRALRTTTHHVIKVLEASGVRYWLEGGSLLGAARNGDIIPWDYDVDLGIYLE
DVTLCTELRGAQSGSLVDAEGYVWERAVEGDFFRVQYSQSNHLHVDLWPFYPRDGVMTRD
SWTGHPQDVEFPESFLQPLQTLPFAGGFAQAPNHHVQLLRMKFGERVIEEPEYPNPTLLR
MRGR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgccccctgtgccatatactgattagcctgactctgctgtgtaacatccttcta
ctctactacacatggcatctgcagttccgctcatcaggacgacagaccccattatctgca
ctatctccaggcatcactgtaattgtaagagagttccaggaatttgaaaatggcctggca
gagttaaatcattccttccttcgagctcggccttcccttcgcattcttattgcatccaac
actcctccttaccctccagtccaaggactccacattttaaggctgcatccctctccagag
cagtcaagttcctctctccgattggagtcccatatacacacccgccttgtagctcttgtt
ccagatggcacttctttggaccctccagatctgcttgacaggatggcacgggagttgcgt
gatgcttcaccaggtgtgaaaattattgctgcagctgcaggccaggaaatacagtgtttg
taccttaatgtatccatgaagcaatggacagctgtgtacaggcctgcaacagccaaagaa
acctgcacggcagttgttggaactgctgtgttgctgctgcgttcccgtgacttatttgag
ctgccctttcctctcattcgacccttgcagttagccctatttatccagactgctttgcgt
ggctggggtgtacaagtgcttaaggatgcctcctttccacgtactactatgcctgctaca
gaccatggacgctggaaggcagaacaggctgagaaaaaggaagaggcccaaaccatgagg
gctctaaatgtgcgactggtcaaaggccttgttggaggggatcgatggtttggttgctcc
aaggacacccagcgttgctttggaacagtggtggagggcactcctcagtacctatataac
aaccaatggacaccaccttgttgccttcgtgcactgaggacaacgacacaccatgtcata
aaggtgttggaggcaagcggggtgcgatattggttagagggtgggagtctgttaggggca
gcacggaatggagatatcattccttgggactatgatgtagatttgggcatctatctggaa
gatgtgacattgtgtacagagctgcggggggcacagtcaggctcactagtggatgctgaa
ggatatgtttgggaacgtgcagtagaaggagatttctttagggtgcaatacagccaaagc
aatcatctgcatgtggatctgtggcctttctatccccgggatggcgttatgacacgtgac
tcgtggacagggcatccacaggatgtagagttccctgagagctttctgcagcctctgcag
actctgccatttgctggtggatttgcacaggccccaaaccaccatgttcagttattacgc
atgaagtttggtgaaagggttattgaagagcctgagtacccaaacccgaccctgcttaga
atgagagggaggtga
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