Xenopus tropicalis (tropical clawed frog): 100145314
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Entry
100145314 CDS
T01011
Symbol
fads2
Name
(RefSeq) fatty acid desaturase 2
KO
K10226
acyl-CoA 6-desaturase (Delta-6 desaturase) [EC:
1.14.19.3
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00592
alpha-Linolenic acid metabolism
xtr01040
Biosynthesis of unsaturated fatty acids
xtr01100
Metabolic pathways
xtr01212
Fatty acid metabolism
xtr03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00592 alpha-Linolenic acid metabolism
100145314 (fads2)
01040 Biosynthesis of unsaturated fatty acids
100145314 (fads2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
100145314 (fads2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xtr01004
]
100145314 (fads2)
Enzymes [BR:
xtr01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.19 With oxidation of a pair of donors resulting in the reduction of O2 to two molecules of water
1.14.19.3 acyl-CoA 6-desaturase
100145314 (fads2)
Lipid biosynthesis proteins [BR:
xtr01004
]
Desaturase
Front-end
100145314 (fads2)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FA_desaturase
Cyt-b5
Jiv90
Motif
Other DBs
NCBI-GeneID:
100145314
NCBI-ProteinID:
NP_001120262
Xenbase:
XB-GENE-1010230
UniProt:
B1H179
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Position
4:complement(22500095..22519690)
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AA seq
429 aa
AA seq
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MGMGGQSGEEIQKHNLKTDKWLVIERKVYNITQWVKCHPGGMRVIGHYAGEDATDAFHAF
HPDKNFVRKFLKPLYVGELAENEPSQDRDKNAQQVEDFRALRKTAEDMGLFKSNPAFFIV
YLFHILLIEFLAWCTLHYFGTGWIPTILTVLLLTISQAQAGWLQHDFGHLSVFKKSKWNH
LIHKFIIGHLKGASANWWNHRHFQHHAKPNIFRKDPDVNMVNVFVLGDTQPVEFGKKRIK
YLPYNHQHLYFFLIGPPLLIPIYFTIQIMKTMITRKDWVDLAWSVSYYARFFITFVPFYG
VLGSLALLNAVRFIESHWFVWVTQMNHLPMVIDHEKYKDWLETQLAATCNIEPSFFNDWF
SGHLNFQIEHHLFPTMPRHNYWKIAPLVRSLCSKYNVTYEEKCLYHGFRDVFRSLKKSGQ
LWLDAYLHK
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggggggacagagcggcgaggagatccagaagcacaacctgaagacagacaag
tggctggtgatagagcgcaaagtgtacaacatcactcaatgggtgaagtgccacccgggg
ggcatgagagtcatcgggcactacgctggggaggatgccacggacgccttccatgccttc
catccagacaagaactttgtcaggaaattcctcaagccactgtacgtcggggaacttgcc
gagaacgaacccagccaggaccgggacaagaatgcacagcaggtggaagacttccgagcg
ctacgcaaaacagccgaggatatgggcctttttaagtccaacccggccttctttatcgtt
tacctgttccacatcctgctgatcgagttcctggcctggtgcaccctccactattttggt
actggttggatacccaccatactcaccgttctgctcctcaccatttcccaggctcaggct
ggctggctccagcatgattttgggcatctctccgtcttcaagaaatcaaaatggaaccac
ttaatccacaaatttatcatcggccatctaaagggagcatctgcaaactggtggaatcac
agacacttccagcaccacgcaaagcccaacatattcaggaaagatcctgatgtgaacatg
gtgaatgtgttcgttctcggagacactcagcctgtggagtttggcaagaagaggattaag
tatttgccgtataatcaccaacacctttatttcttcctgattggcccgcctctgctgatt
cctatatatttcaccatccaaattatgaaaaccatgataactcggaaagactgggtggat
ctggcctggtcagtatcttattatgcacgatttttcatcacgtttgttccattctatggc
gtgttgggttccttagccctgctcaatgctgtgaggttcatcgagtcgcactggtttgta
tgggtgacacagatgaatcacctccccatggttattgaccatgagaagtacaaggactgg
ctggaaacccagctggctgctacttgcaacatagagccatcattcttcaatgactggttt
agtgggcacctcaacttccagattgagcatcatctgtttcctaccatgccgcgccacaac
tactggaagatcgctcccctggtccgctctctatgcagcaaatacaacgtgacttatgaa
gagaagtgcttgtaccacggctttagggatgtctttaggtccctgaagaagtcaggccag
ctgtggctagatgcctacctccataagtga
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