Xenopus tropicalis (tropical clawed frog): 100158595
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Entry
100158595 CDS
T01011
Name
(RefSeq) uncharacterized protein LOC100158595
KO
K10260
F-box and WD-40 domain protein 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100158595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100158595
04121 Ubiquitin system [BR:
xtr04121
]
100158595
Membrane trafficking [BR:
xtr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
100158595
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100158595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
F-box-like
EIF3I
WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
F-box
Beta-prop_WDR41
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
DSE1_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_Nup120_160
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_NWD2_C
Beta-prop_Aladin
Beta-prop_ACSF4
ASA1
Beta-prop_VPS8
Beta-prop_SPT8
TRM82_WD
Beta-prop_DCAF12
Hira
NBCH_WD40
F-box_4
Beta-prop_DCAF4
PBP-Tp47_a
Motif
Other DBs
NCBI-GeneID:
100158595
NCBI-ProteinID:
XP_031756550
Xenbase:
XB-GENE-5721469
UniProt:
F7A7X3
LinkDB
All DBs
Position
4:2360261..2361969
Genome browser
AA seq
423 aa
AA seq
DB search
MEAGEPQDCTSWLPDELALRILSYLDAKDILQVAQTCQRWRELAQYDSLWCEKCKADGIE
EPPQVTRSRAKGSRPRPWKSAYTNQLRVDTNWRRGRFRTITLDTSESGVDFPWTSDGKEM
ICIVNKNAIKIWSTVTGKPIRALVGHTDKILTLRMRDHMIVSGSLDHTVKVWNAESGECI
HTLGGHTGAVSHLFLHGNRVASGSCDDSIRIWDIETGQCLHVLMVDIDFDSYINYDGRWV
ISMNDGSNLKFWDPETQSCLRSFPIPMVVVHHTELKGSRLLLVTDDGTITVWDTDTGRRI
QTITDLQTYISAVSLRANIFIWGDKGLPAGFDRKRFQRYVENVRLRSHFDLSNTGFGPVP
LWGLWWGMGWDENAENYLRGLIRRHKFMHFIMFCRTKVICMIEERSSEMIKVLDFNWEIK
VRY
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggggagccccaggactgtacctcctggttacctgatgagttggcattgcgc
atcctctcgtaccttgatgccaaggatatcctgcaggtggcgcagacttgccagcgctgg
agagagttggcacaatatgattctctatggtgtgaaaagtgcaaggctgatgggattgag
gagccgccgcaggtaacaaggagcagggctaaaggctctaggccccgcccctggaaaagc
gcttacaccaatcagctcagggtcgataccaactggcgccgagggagattcaggacaatc
acactggatacaagtgagtcgggtgtggatttcccctggacctctgatgggaaggaaatg
atttgtattgtaaataaaaatgcaataaagatctggtccacagttactggaaaacccata
cgggcccttgtgggacacacagacaaaattttaacattacgaatgagagatcacatgatt
gttagtggatccttggatcatacagtaaaagtatggaatgcagagagcggggaatgtatc
cacacgctgggcggccatactggcgctgtgtcacacttatttctccatgggaacagggta
gcgagtgggtcatgtgacgactccatcagaatctgggatattgagacggggcagtgccta
cacgttctcatggtggatatagactttgattcatatattaactatgatggtcgatgggtg
atcagtatgaatgacggatccaacctgaaattctgggaccccgaaacacagagctgtttg
cgcagtttcccaattcccatggttgtcgtccatcacacggagctgaaaggctcgcggctc
ttactggtcactgacgacggcacaataaccgtgtgggacactgacacagggcggcgcatc
caaacaataacggatcttcagacctacatatccgcagtatcactgagggccaatatattc
atctggggagataagggccttcctgctggttttgaccggaagagatttcagcgctacgtg
gaaaatgtgcgactccgcagtcactttgacttgagcaacactgggtttgggccggtgccg
ctctggggtttgtggtggggaatgggttgggatgagaatgcagagaattatttgcgaggc
ttgatcagaagacacaaattcatgcactttatcatgttctgtcgtacaaaagttatctgc
atgattgaggagagatctagtgaaatgattaaagtgttggactttaattgggagattaaa
gttagatactga
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