Xenopus tropicalis (tropical clawed frog): 100170153
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Entry
100170153 CDS
T01011
Symbol
thbs1
Name
(RefSeq) thrombospondin-1
KO
K16857
thrombospondin 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04115
p53 signaling pathway
xtr04145
Phagosome
xtr04148
Efferocytosis
xtr04350
TGF-beta signaling pathway
xtr04510
Focal adhesion
xtr04512
ECM-receptor interaction
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100170153 (thbs1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100170153 (thbs1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100170153 (thbs1)
04148 Efferocytosis
100170153 (thbs1)
09143 Cell growth and death
04115 p53 signaling pathway
100170153 (thbs1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100170153 (thbs1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100170153 (thbs1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100170153 (thbs1)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xtr00536
]
100170153 (thbs1)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Phagocytosis
Opsonins
100170153 (thbs1)
Glycosaminoglycan binding proteins [BR:
xtr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100170153 (thbs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
VWC2L_2nd
TSP1_CFP_C
EGF_3
cEGF
TSP1_ADAMTS
Laminin_G_3
EGF
TSP1_CCN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
100170153
NCBI-ProteinID:
XP_002937245
Xenbase:
XB-GENE-486189
UniProt:
A0A6I8RQ44
LinkDB
All DBs
Position
8:119061506..119075197
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AA seq
1176 aa
AA seq
DB search
MGMMKGIFLLLMLAVPQTYQAAESGNDDNSVFDLFELTGYNRKTGSRKPEGLHLVKGPDP
SSPAYRIEDADLIPPLPEVKFQDLLDAIRADRGFILLATLRQAKKSRGALLSVERKDGAG
HIFSLISNGRAGTLDLSLSGERKQQVVSVEDALLATGHWKNITLFVQDDRAQLYVGCDKM
ENAELDVPIQKIFTEDLASKAHLRVAKGGVKDNFQGVLQNVRFVFGTTLEAILRNKGCSS
MTNSVITLDNPVNGSSPAIRTNYIGHKTKDLHAVCGISCDDLSKLFAEMKGLRTLVTSLQ
DQVTKETERNELIAQRVTMTPGACLHNGVLHKNRDEWTVDSCTECTCQNSATICRKVSCP
LMPCTNATIPDGECCPRCWPSDSADDDWSPWSDWTPCSVTCGHGIQQRGRSCDSLNNRCE
GSSVQTRSCHIQECDKRFKQDGGWSHWSPWSSCSVTCGSGQITRIRLCNSPVPQLNGKPC
EGEGRENKPCQKDPCPINGQWGPWSLWDTCTVTCGGGMMKRERLCNNPKPQYGGKECIGD
PTDSQICNKQDCPIDGCLSNPCFAGVKCTSFIDGSWKCGSCPPGYRGNGITCKDIDECKE
VPDACFSLNGVHRCENTEPGYNCLPCPPRFTGTQPFGKGIDEAKANKQVCKPRNPCADGT
HDCHRNARCIYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNENLTCVANATYHCM
KDNCPNLPNSGQEDYDKDGMGDACDKDDDNDGILDDRDNCQFVYNPAQYDYDRDDVGDRC
DNCPYNHNPDQADTDRNGEGDACAVDIDGDGILNERDNCPYVYNVDQRDTDKDGVGDQCD
NCPLEHNPEQTDSDSDLIGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDAC
DHDDDNDGVPDDKDNCRLVPNPDQTDSNGDGRGDACQYDFDDDNIPDAEDVCPENVEIST
TDFRKFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFI
NTERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWDTTPTVAQGYSGLSIKVVNSTSGPGE
HLRNALWHTGNTPGQVRTLWHDPHQIGWKDFTAYRWHLTHRPKTGFIRVVMYEGKKVMAD
SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggggatgatgaagggcattttcctactgttgatgttggccgtgcctcaaacatatcaa
gcagcagaatctgggaatgatgataacagtgtatttgatctgtttgagttaacgggatac
aaccgcaaaactggttctcgtaagcctgaaggactccatttagtaaagggacctgaccct
tcaagcccagcttatagaattgaagatgctgacttgatcccaccactgccagaagtcaaa
tttcaagatttgctggatgcaatacgtgctgatagggggttcattttgttggcgactctg
cgtcaagcaaagaaaagtcgaggggcacttctgtctgtggagagaaaagatggcgcaggg
cacatcttcagtctgatctccaatggccgggctggaaccctagatttaagtttaagtgga
gaaaggaagcagcaggtggtgtctgtagaagatgctctcctagctactggccactggaag
aacatcaccctctttgtacaagatgaccgcgcacagctctatgtaggatgtgacaagatg
gaaaatgctgagctagatgtgccaatacagaaaatatttactgaggacctggcaagcaaa
gctcatcttcgagtagcaaagggaggagtaaaggacaactttcagggagtccttcagaat
gtacgctttgtgtttggaaccacattggaagctattctgagaaacaaaggctgctcaagc
atgacaaactcagtcatcactttggacaacccagtgaacggctcaagcccagccatccga
acgaattacattggccacaaaacaaaggacctgcatgctgtgtgtggcatttcctgcgat
gatctgtccaaactgtttgcagaaatgaaaggcttacggacgctggtcacatctctccag
gaccaagtcaccaaagagacggagaggaatgaacttattgctcagcgagtaacaatgacg
ccaggtgcttgtctccacaatggagtcttgcataagaacagagatgagtggaccgttgac
agctgcactgaatgcacatgtcagaactcagctaccatatgccgtaaggtatcttgccct
ctgatgccctgtaccaatgccaccattccagatggggaatgctgtcccagatgttggcca
agcgactcagctgatgatgattggtctccatggtcagattggacaccttgctctgtgaca
tgtggtcatggcatccagcagagaggacgttcttgcgacagccttaataaccgctgcgaa
ggttcttctgtacagacacgatcttgccatatccaggaatgtgacaagagatttaagcaa
gatggtggatggagccactggtcaccttggtcatcatgctcagttacctgcggaagtggt
caaatcaccagaatccgtctctgcaactcccctgttcctcagctgaatggaaagccatgc
gaaggggaaggaagggagaacaagccatgtcagaaagacccatgcccaattaatggtcag
tggggtccttggtcactgtgggacacatgcactgttacttgcggtggtggaatgatgaag
agggagcgtctctgcaataaccccaaacctcagtatgggggtaaagagtgtattggagat
cctactgattctcagatctgcaacaaacaggactgtcccatagatggatgtctctctaac
ccttgctttgctggagtcaaatgcaccagcttcattgatggatcttggaaatgtggttcc
tgcccaccagggtacagaggaaacggaataacatgcaaagatattgatgagtgcaaagag
gtgcctgatgcctgcttcagcctgaatggagttcatagatgtgagaatacagaaccagga
tataattgtctcccatgccctcctcggttcacaggaactcagccatttggcaaaggcatt
gatgaagctaaagccaataagcaggtttgcaagcctcgcaacccatgcgccgatggtacc
cacgactgtcacaggaacgccagatgtatctaccttggacactacagcgaccccatgtac
cgctgtgagtgcaaacctggatacgcaggaaatggaatcatttgtggtgaagacacagat
ttggatggctggccaaacgagaacctcacatgtgttgctaatgctacctatcactgcatg
aaagataactgccccaacctccccaactcaggccaggaagactatgataaggatggaatg
ggagatgcctgcgataaagacgatgacaatgatggaatcctagatgacagggacaactgt
cagtttgtgtataacccagcacagtatgactatgatcgtgatgacgtgggagaccggtgt
gacaactgcccttacaaccacaacccagaccaggctgacacagaccgcaatggagaagga
gatgcctgtgctgtggacattgatggagatgggatcctaaacgagagggataactgcccc
tatgtgtacaatgtcgaccagagagacacagataaggatggtgttggagaccaatgtgat
aactgcccactggaacacaatccagaacagactgactctgattctgacctcattggcgat
aagtgtgacaacaaccaagatatagatgaggatgggcatcaaaataacctagataactgc
ccctacatccccaatgccaaccaagcagatcatgataaggatggcaagggtgatgcatgt
gaccatgatgatgacaatgatggtgttcctgatgacaaagataactgccgattggtccct
aacccagaccaaacagattctaatggtgatggccgtggagatgcttgccaatatgacttt
gatgatgataacatacccgatgcagaagatgtttgcccagagaatgtggaaatcagcact
actgacttccgtaaattccagatggtgcctttggatcccaaagggacatcacagattgat
cctaactgggtggtgagacaccaaggcaaagaattggttcagactgttaactgtgatcct
ggaattgcagttggttttgacgagttcagtgctgttgacttcagtggcacatttttcatc
aacaccgagagagatgacgattatgccggctttgtgtttggataccaatccagcagcagg
ttttacgtagtcatgtggaagcaaatcactcagacatactgggacacaactcccactgta
gctcagggctactctggcctctcaatcaaggttgtgaactctaccagcggaccaggggag
cacctacgaaatgcactgtggcacacaggaaacacccctgggcaggttcgcaccttgtgg
catgatcctcaccagatcggctggaaagattttacagcttacagatggcacctgacccac
agaccaaagaccggtttcattagagtcgtcatgtatgaaggcaagaaagttatggctgac
tcaggaccaatctatgataaaacatatgctggaggaagattaggattattcgtcttctca
caagagatggtcttcttttctgatctcaaatacgagtgcagagactcttaa
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integrated database retrieval system
