Xenopus tropicalis (tropical clawed frog): 100329116
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Entry
100329116 CDS
T01011
Symbol
flnc
Name
(RefSeq) filamin-C isoform X3
KO
K27393
filamin-C
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100329116 (flnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
100329116 (flnc)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100329116 (flnc)
Intermediate filaments
Intermediate filament-binding proteins
100329116 (flnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
Ig_GEX2_N
CH
Y_Y_Y
Big_3_5
CFSR
CH_2
Motif
Other DBs
NCBI-GeneID:
100329116
NCBI-ProteinID:
XP_002931884
Xenbase:
XB-GENE-493579
UniProt:
A0A8J0QHN3
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All DBs
Position
3:87434850..87489815
Genome browser
AA seq
2723 aa
AA seq
DB search
MSSNDYYDQQQFYQGEEAEEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCMNKRIGDL
QKDLSDGLKLIGLLEVLSQKKMYRKYHSRPNFRQMKLENVSVALEFLDREHIKLVSIDSK
AIVDGNLKLILGLIWTLILHYSISMPMWEDEDEEDAKKQTPKQRLLGWIQNKIPQLPITN
FHRDWQDGKALGALVDNCAPGLCPDWEAWDPNQPVENAREAMQQADDWLGVPQVIAPEEI
VDPNVDEHSVMTYLSQFPKAKLKPGAPLRSKQLHPKKANAYGPGIEPHGNMVLKPAYFTV
ETINAGLGEVLVFVEDPEGHTEEAKVIPNNDKNRTYSVSYVPKVAGLHKVTVLFAGQNIN
KSPFNVNVAMALGDANKVTARGPGLEPVGNVANKPTYFDIYTAGAGSGDVGVIIVDPQNH
QDTVEVILEDKGDNIYRCTYRPNMEGPHKVFITFAGSQIPKCPYVVNISEACNPNACRAT
GRGLQPKGVRVKEVADFKVFTKGAGSGELKVTVKGPKGTEEPVKIRDAGDGVYECDYYPV
LPGKYTVTITWGGYAIPRSPFEVQVSPEVGLQKVRAWGPGLETGMVGKSADFVVEAIGTE
VGTLGFSIEGPSQAKIECDDKGDGSCDVRYWPTEPGEYAVHVICDDEDIKDSPFIAHILP
ASNKGFPEKVKAYGQGLEPTGCIVEHPAEFTIDARAAGTAELKIYAQDAEGSPIDIKIKD
NGDNTYVCVYVPTKPIKHTIIITWGGVNIPNSPYRVSVGEGSHPNKVKVYGPGVEKTGLK
ANEPTYFTVDCSEAGQGDVSIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGK
YTIMVLFADQEIPTSPFRVKVDPSHDASKVRAEGPGLNRTGVEVGKPTHFTVYTKGAGKA
KLDVQFAGSIKGEAVQDFEIIDNHDYSYTVKYTAVQQGTLTVSVTYGGDPIPKSPFNVNV
APPLDLSKVKVQGLNNKVDVGKDQEFSIDTSGAGGQGKVDVKITSPSRRPIPCKVETGVT
SDIHTVKYMPPEEGPYKVDISYDGHPVPGSPFSVEAVMPPDSSKVRAYGPGLKGGFVGKP
APFAIDTKGAGTGGLGLTVEGPCEAKIECQDNGDGSCSVSYLPTEPGEYSINILFAESHI
PGSPFKADIRPVFDPSKVTASGPGLEKGKAGEVATFTVDCSKAGDAELTIEILSDSGSKA
EVLIQNNSDGTYSITYIPACPGAYTITIKYGGHAVPKFPVRVNVEPAVDTSGVKVFGPGV
EPRGVLREVTTEFTVDARSLTKTGGSHVTTRILGPSGAVTESFLSDNGDGTYHVQYTAYE
DGVHLIEVLYDDVPVPKSPFRVPVTEGCDPSRVRAYGPGLEGGLLNKSNRFTVETRGAGT
GGLGLAIEGPSEAKMSCKDNKDGSCSVEYIPFTPGDYDVNITFGGRPIPGSPFRVPVKEI
VDPSKVKCSGPGLGSGVRAHVPQTFTVDCSKAGLAPLEVLVQGPSGLAEPVDIRDNGDGT
HTVNYTPATDGPYTVSVRYADQEVPRSPFKIKVLPTHDASKVRASGPGLNTAGIPASLPV
EFTIDARDAGEGLLTVQILDPEGKPKKANIRGNGDGTYTVSYVPDMAGRYTITIKYGGDE
IPYSPFRIHAVPTGDASKCLVTVSIGGHGLGTCLGPSIQIGEETVITVDAKAAGKGKVTC
KVSTPDGAELDVDVVENQDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVVACDTIPI
IEEPCDTVQLHQPYPAHLPGYPTNWATEEPVVPVENLDTMLRPFNLVIPFTVQKGEITGE
VRMPSGKTARPNITDNKDGTVTVKFAPVEKGLHEMDIKYDGNHIPGSPLQFYVDAINSRH
VSAYGPGLSHGMVNKPATFTIVTKDAGEGGLSLAVEGPSKAEITCKDNKDGTCTVSYMPT
APGDYNIIVRFDDKHIPGSPFTSKITGDDSMRTSQLNVGTSTDVSLKITESDLSLLTASI
RAPSGNEEPCLLKRLPNRHIGISFTPKEVGEHVVSVKKNGKHVTNSPFKIMVGPSEIGDA
SKVKVSGKGLLEGVTFEVAEFIVDTRNAGYGGLGLSIEGPSKVDINCEDMEDGTCKVSYC
PTEPGTYIINIKFAEKHVPGSPFMVKVTGEGRMKESITRRRQAPSIASIGSTCDLNLKIP
GNWFQMVSAQERLTRTFTRSSHTYTRTERTEISKTRGGETKREVRVEESTQVGGDPFHNV
FGEFLGRESLGTFGSITRQEGEAGAQEMTAQVTSPSGQTADAEIIDGEDNTYSVRFVPQE
MGAHTVSVKYRGQHVPGSPFQFTVGPMGEGGAHKVRAGGPGLERGVAGVPAEFSIWTREA
GAGGLSIAVEGPSKAEITFEDRKDGSCGVSYIVQEAGDYEVSIKFNDEHIPDSPFVVPVA
SRSDDARRLTVTSLQETGIIVNQPASFAVQLNGARGVIDAKVHTPSGMVEECYVSEVDSD
KYSIRFIPRENGVHSIDVKFNGRHIPGSPFKIRVGEQSQAGDPGLVTAYGLGLEGGVTGR
PSEFIVSTLNAGAGSLSVTIDGPSKVKLDCQDSPEGYKVSYTPMAPGNYLISIKYGGPQH
IVGSPFKARVTGVRLSGGHSLHETSTVLVETVTKSSASVGGYAMTAPKFSSDASKVVSRG
PGLSKAFVGQKNTFTVDCSKAGTNMLMVGVHGPKTPCEEVYVKHMGNRLYNVTYTVKDKG
DYILIVKWGDQNVPGSPFQVAVP
NT seq
8172 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacgattattacgaccagcagcagttttaccagggcgaagaggcagaggag
atgcccgctacagagaaggacttggcagaagatgccccttggaagaagatccagcagaac
accttcaccaggtggtgtaatgagcatctcaagtgcatgaacaagcgcattggggacctg
cagaaggacctgagtgatggcctgaagctcataggcctgctggaggtgctcagtcagaag
aagatgtacagaaagtaccattccagacccaactttcggcagatgaaactggagaacgtg
tcagtggctctggaattcctggatcgggagcacatcaagctggtgtctatagattcaaaa
gccattgtagatgggaacctaaagctgatcctgggtctaatctggacacttatccttcac
tactccatttctatgcccatgtgggaggatgaggatgaagaagatgcaaagaagcagact
ccaaagcagagacttctgggatggatacaaaacaaaataccacagcttccaatcaccaat
ttccaccgtgactggcaggatggcaaagctttgggagctcttgtggacaattgtgcccca
ggtctgtgtccagactgggaggcctgggatcccaaccagcctgtggagaatgcaagagag
gccatgcaacaagcagatgattggttgggagtaccacaggtcattgccccagaggagatt
gtagatcccaacgtggatgaacattcagttatgacttacctgtcacagtttcctaaagcc
aaattgaaaccaggagcaccactccgatccaagcagttacaccccaagaaagcaaatgcc
tatggaccaggtattgagcctcatggaaacatggttctgaaacctgcctacttcacagta
gagaccataaatgctggtctgggggaagtattagtgtttgtggaagatcctgaaggacac
acagaagaggccaaagttattcctaacaatgacaagaacagaacctactcagtaagctat
gttccaaaggttgccggccttcataaggtcactgtgttgtttgctggccagaatatcaac
aaaagtccattcaacgtcaatgttgccatggcattgggagatgctaataaggtgacagca
cgaggacctggactggagcctgttggaaatgttgccaataaaccaacatattttgatatc
tacactgcaggtgctgggtctggtgatgttggtgtaatcattgtagacccacagaaccat
caagatacagtggaagtcattttagaagacaaaggggacaatatatatcgctgcacttat
cgtcccaacatggagggaccccacaaagtcttcattacttttgctgggtctcaaatcccc
aaatgcccatatgttgtcaatatctcagaagcatgtaatcccaatgcctgcagagccaca
ggccggggcttacagcccaaaggtgtgcgtgtgaaggaagtggctgatttcaaagtattc
accaaaggagctggaagtggagaacttaaagtcactgttaaagggccaaagggtacagag
gagccagttaaaatccgcgatgcaggggatggtgtatacgaatgtgattattacccagtg
ttgccaggaaaatatacagtgactatcacatggggtggatatgccatccccaggagcccc
tttgaagtccaagttagcccagaagtgggattacagaaagtgagagcatggggtcctggc
ctagagactggcatggttggtaaatcagctgactttgtagtggaagcaataggcacagaa
gttggaactcttggcttctccattgagggcccatcccaggcaaagattgagtgtgatgac
aagggtgatggatcttgtgatgtacgctattggcccacagaacccggcgagtatgcagtt
catgtaatttgtgatgatgaagatataaaagacagccctttcattgctcatatcctgcca
gctagcaacaaaggattccctgagaaggttaaagcatatggacaaggtttagaacccaca
ggctgcatagtagagcatcctgctgagtttactattgatgctcgggctgctggcacggct
gaactgaaaatatatgctcaggatgcagaggggtcaccaattgacatcaagatcaaggac
aatggtgacaacacctatgtgtgtgtctatgtaccaaccaagccaatcaagcacacaatc
attattacatggggaggagtcaatattccaaacagcccgtatagggtgtcagtcggagag
ggcagtcatcccaataaagtaaaggtttatggacctggcgtagagaagacaggactaaaa
gccaatgagccaacatattttacagtggactgcagtgaagctggacaaggagatgtcagc
attgggattaagtgtgctcctggagttgtgggaccagcagaagcagatattgactttgac
attatcaagaatgacaacgatacatttactgtaaaatacacaccccctggagcagggaaa
tatactatcatggtgttgtttgctgaccaggaaatacctaccagtccattccgagtcaag
gtagatccctcacatgatgctagcaaagtccgtgcagaaggcccagggcttaaccgtaca
ggagtggaggttggaaaacccacacattttactgtttacaccaagggagctggtaaggct
aaacttgatgttcagtttgctgggagcattaagggtgaagctgtgcaagactttgaaatc
attgataaccatgactattcatacactgtgaagtatacagcagtgcagcagggtacctta
actgtgtcagtaacttatggaggggaccccattcctaaaagtcctttcaatgttaatgtg
gcacctcctctagatttgagcaaagtcaaggttcaagggcttaacaacaaggtagatgtc
gggaaagaccaggagttctcaattgataccagtggagctggaggtcaaggaaaagtggat
gtgaagatcacatctccttctcgtcggccaataccctgtaaagtagagactggagttaca
agtgacattcacacggtgaaatacatgccccctgaggagggcccatataaagtggacatc
agctatgatggacatcctgtaccaggaagccccttctctgtggaggcagtaatgccacct
gactcttccaaggttcgtgcctatggacccggattgaaaggaggttttgtaggaaaacca
gccccatttgcaattgacaccaaaggagctggtacaggaggattgggtcttacagtagaa
ggtccatgtgaggcaaaaattgaatgccaggataatggagatggctcctgctcagtttct
taccttcccactgaaccaggggaatattctataaacatcctatttgcagaatcccacata
ccaggctctccattcaaggctgacatccgccctgtctttgaccccagcaaggtcacagct
agtgggcctgggcttgaaaaaggaaaagctggtgaagtggccaccttcaccgtggattgc
tccaaagctggggatgcagagcttacaattgagatcctgtcagattcaggttcaaaggct
gaagtactgattcagaataacagcgatgggacctacagcatcacctacattccagcatgc
cctggagcctacacaattaccatcaagtatggaggtcacgctgtcccaaaattccctgtg
cgtgtaaatgtagagcctgcagtagacaccagtggcgtgaaggtgtttggcccaggggtg
gaacccagaggggtgcttcgtgaggtaactacagaattcaccgttgatgctcgttccctc
actaagactggtggcagtcacgtgaccacgcgcattctcggcccctctggagctgtcact
gagagtttcttatcagacaatggagatggcacctaccatgtgcagtatacagcgtatgag
gatggagtgcacttgattgaagttctttatgatgatgttccagtgccaaagagcccattt
cgtgtgcctgtgactgagggctgtgatccatctcgtgtacgggcatatggtccagggctt
gaaggagggctgcttaacaagtctaaccgttttactgtggagacaaggggagctggaact
ggggggcttggtctggccatagaaggtccttctgaggcaaaaatgtcatgtaaggataat
aaagatggaagttgcagtgtggaatacataccatttactccaggagattatgatgtgaat
atcacatttggggggcgtcccattccaggaagtcccttccgtgttccagttaaggaaatt
gtggaccccagcaaggtgaagtgttctggtcctgggcttggatctggtgtcagagcccat
gttcctcagactttcacagtggattgtagtaaagctggactggcaccactagaagtgctg
gtgcaaggaccctcaggtttggcagagcctgtagatataagagataatggagatgggaca
cacacagttaattatactccagccacagatggaccatacactgtgtctgtaagatatgct
gatcaggaggtgccacgaagcccattcaagatcaaagtgctgccaacccatgatgccagc
aaagtgcgcgccagtggccctggtctcaacacagcaggtattccagccagcctgcctgtt
gagtttaccattgatgcccgtgatgcaggggaaggtctgctaactgttcagattctggac
cctgaaggtaaaccaaagaaggcaaatattagaggcaatggtgatggcacctacacagtg
tcttatgtaccagacatggctggaagatacactatcaccatcaaatatggaggagatgaa
attccttactcacctttccgaattcatgctgtgcccactggtgatgccagcaagtgctta
gtgacagtgtctattggtggacatggattaggaacatgcctgggaccctcaattcagatt
ggggaggagactgtcatcacagtggatgctaaagctgcagggaaaggcaaggtgacctgc
aaagtatcaacacctgatggagcagaactggatgttgatgtagtggaaaatcaggatgga
acttttgacatttactacacagctcctgagcctggcaaatatgtaatcacaattcgtttt
ggtggcgagcacatacccaacagccccttccatgttgtggcatgtgacaccattcccatc
atagaggaaccgtgtgatacagtacaactacaccagccctaccccgcacacctccctggc
tatccaactaactgggccacagaggagccagtagttcctgtagagaatttggataccatg
ctgaggccattcaatttagtcattccctttactgtgcaaaaaggggaaattacaggtgaa
gtacgtatgccttctggtaagacagctcgtcctaatattacggataacaaagatggcact
gtcactgtgaaatttgcacctgttgaaaaaggactacatgagatggacataaaatatgat
ggaaaccatattccagggagcccactgcagttttatgtagatgccattaatagcagacat
gtaagtgcatatgggccaggactgagtcatggaatggtgaataaaccagcaacgtttact
attgttacaaaggatgccggtgaaggtggattatccctagcagtggaaggaccatcaaaa
gctgagatcacttgcaaagacaataaagatggcacttgcaccgtatcctacatgccaaca
gcccctggtgattataacatcattgtgagatttgatgataagcacatccctggtagcccc
ttcacatccaaaataacaggtgatgactcaatgagaacttcccagctgaatgtgggaacc
tccacagatgtttccctcaagattacagaatcagacttgagtttgcttactgctagtatc
agagctccatctggaaatgaggagccgtgtctactaaagaggcttcccaacaggcacatt
ggcatttcatttacaccaaaagaagttggtgagcacgtagtaagtgttaagaagaatggg
aagcacgtcactaatagcccattcaaaatcatggtgggaccatctgaaattggagatgcc
agcaaggtgaaagtgtctggaaagggactgctggagggagtaacatttgaagtggctgaa
ttcattgtagacaccaggaatgcaggatatggaggattgggcttatccattgaaggccca
agtaaggtggatattaattgcgaagatatggaagatggaacatgtaaagtgtcttactgt
cctactgagcctggaacatacattataaacattaagtttgcagaaaagcatgtgccagga
agtccatttatggtaaaagtgacaggtgagggacgtatgaaggagagcataacccgaagg
cgtcaggctccttctattgcgagcattggcagcacctgcgatctcaacttgaagatacca
ggcaattggttccagatggtatcagctcaagaacgtttaactcgcacctttacacgtagc
agccacacatacactcgtacagagcgcacagagatcagtaagacccgaggaggtgagaca
aagcgcgaagtgcgtgtggaggaatctacacaggttggcggtgatcctttccataatgtg
tttggagagtttctgggtcgggaaagcctaggaacatttggcagcatcacaaggcaggaa
ggagaggctggtgcccaggaaatgacagcccaagtaacaagcccctctggacaaacagca
gacgctgaaataattgatggtgaagataacacatacagtgtgcgttttgtgccacaggag
atgggtgctcacacagttagcgtcaagtaccgtggccagcatgttcctggtagtcccttc
cagttcactgttgggcctatgggagagggaggcgcccataaagtcagggctggaggcccc
ggcctggaaagaggagttgcaggtgtaccagctgaattcagcatctggacacgagaggca
ggagctggaggtctatcaatagcagtagaaggtccaagcaaagcagagatcacttttgaa
gatcgaaaggatggatcctgtggagtgtcttacattgtacaagaagcaggtgattatgag
gtttccatcaaatttaatgatgagcacattccagacagcccctttgtagtacctgtggct
tcccgttctgatgatgcccggagactgacagtcaccagcctacaggagactggaataatt
gttaatcaaccagcttcatttgctgtacaactgaatggagcccgtggagtgatagatgcc
aaggttcacaccccatcaggaatggttgaggagtgttatgtatcagaagttgatagtgat
aagtactcaatccgtttcattccacgggaaaatggtgtgcactccattgatgttaaattt
aatgggcgccacataccaggcagtcccttcaagattcgtgtgggagaacaaagtcaagca
ggcgaccctggtcttgttacagcttatgggcttggactggagggtggagtcacaggtaga
ccctctgagttcattgtaagtactctaaatgctggagctggatccctctctgttactatt
gatggaccttctaaagtgaaactagactgtcaggattcccctgagggatataaagtctca
tacacaccaatggcccctggaaactacttgatttccatcaaatatggaggcccacaacac
attgtaggaagtccatttaaggccagagtgacaggtgtacgtctgtcaggtggtcacagc
cttcatgaaacctccacagtgttggtggaaactgtcaccaaatcctctgcatctgttgga
ggatatgcaatgacagcacctaaattctcatcagatgcttccaaagtggtatcccgtgga
cctggcctgtctaaagcctttgtgggacagaaaaacacattcactgtggactgcagcaaa
gctggcaccaacatgctaatggtaggagtgcatgggccaaagaccccctgtgaggaggtg
tatgtaaagcacatgggaaaccgactgtacaatgtgacctacactgttaaagataaaggg
gactacatcttgatcgtcaagtggggtgaccagaatgtccctgggagtccatttcaagtt
gctgtcccttga
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integrated database retrieval system
