KEGG   Xenopus tropicalis (tropical clawed frog): 100379935
Entry
100379935         CDS       T01011                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03420  Nucleotide excision repair
xtr04110  Cell cycle
xtr04114  Oocyte meiosis
xtr04120  Ubiquitin mediated proteolysis
xtr04141  Protein processing in endoplasmic reticulum
xtr04310  Wnt signaling pathway
xtr04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    100379935 (rbx1)
   04120 Ubiquitin mediated proteolysis
    100379935 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    100379935 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    100379935 (rbx1)
   04350 TGF-beta signaling pathway
    100379935 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100379935 (rbx1)
   04114 Oocyte meiosis
    100379935 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xtr04121]
    100379935 (rbx1)
   03400 DNA repair and recombination proteins [BR:xtr03400]
    100379935 (rbx1)
Enzymes [BR:xtr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     100379935 (rbx1)
Ubiquitin system [BR:xtr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   100379935 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     100379935 (rbx1)
   Cul2 complex
     100379935 (rbx1)
   Cul3 complex
     100379935 (rbx1)
   Cul4 complex
     100379935 (rbx1)
   Cul7 complex
     100379935 (rbx1)
   Cul8 complex
     100379935 (rbx1)
   Cul9 complex
     100379935 (rbx1)
DNA repair and recombination proteins [BR:xtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      100379935 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      100379935 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003
Other DBs
NCBI-GeneID: 100379935
NCBI-ProteinID: XP_002934772
Xenbase: XB-GENE-5779767
UniProt: A0A6I8S8I3
LinkDB
Position
4:complement(115967166..115972700)
AA seq 120 aa
MRHIDPEFPLFKMAAAMDVDTPSGTNNSASKKRFEVKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 363 nt   +upstreamnt  +downstreamnt
atgcgccatatagacccggaatttcctcttttcaaaatggcagccgcaatggatgtagac
acaccaagcggaacgaataacagcgctagtaagaagcgctttgaggttaagaagtggaat
gcagttgccctttgggcctgggacattgtagtggacaattgtgccatctgcaggaaccac
atcatggacttgtgcatagagtgccaagcaaaccaagcttctgctacttctgaggaatgc
actgtggcatggggtgtgtgtaatcatgcatttcacttccattgcatttcacgctggctg
aagactcgacaagtttgcccgctggataatagagagtgggaatttcagaagtatggtcat
tag

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