Xenopus tropicalis (tropical clawed frog): 100486182
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Entry
100486182 CDS
T01011
Symbol
smcr8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100486182 (smcr8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100486182 (smcr8)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100486182 (smcr8)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
100486182
NCBI-ProteinID:
XP_002935890
Xenbase:
XB-GENE-953399
UniProt:
A0A6I8PX58
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All DBs
Position
9:complement(15935022..15942748)
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AA seq
935 aa
AA seq
DB search
MIGSPDLVPFTMEEGYEEPFHGASGLPEEYTVPLFPFSQANSSPWSRLCAAKFSRDFILI
SEFSEQVGPQPLLTIPDDQRICGEFDLNYFSLRIMSVDYQASFVGHPPGSSYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISMDEEKIMRQFLELSSDFSKAS
KCLKTGNRKAFANELEKKLRDLDYTRTVLQREMEEQMKADDKGFYTTQTIDKANELASVE
KSIIEHQDLLKQIQLYPYRKIKEPDFQPYEPESLQDSDVPNESEQPLPPSNPEESLVEEE
SSLYHPRSSYTPKFIKAKSSKCFDKKLKTLEELVDIYFFTQTIDLLTSIEKRYRGDLSYL
LMKQLEKGLLEQQTVSNFLFEDIATWDAKLSSMHCSNTLALVQALQNPTFLEEPGNLKNS
ASLESYKSSVESVPIKIEQEVFEEGNHQETAERGVSDIPDNCEFNDVDFKGSVSSSDSIE
VLRTEKSVALLTHSESQPCLRLSPQPPRRKVGSRRTISEDSIEVLSTCPSESVIPEDFRP
AYQIAIHEEDPDGVDVDGEQPCNSTNNEENEPSPNDLSGDPACCMGAETLLAQTGNVTPV
PNDGDINKVVSVPPQSYRNMDHAFQVKFSVDRAENHSNKVSPHGLSSPEAESTYLMSSGE
SVRLSIEEYSDSTSYRSSTSTCSDRTPSPAPCVSGLSERHRRKAGQNALMFIRQYPFSHP
AIYSLLCGRTLIVLGEEEAFVRRLVTALSIFVPNHGHVAKPVNTWMTSPLHIMDFQKWKL
IGLQRGGSPSSTNILHSLNRYSRYASVLDADHKTLRCPVYKGAFLQRLADHRTQIRRGST
YYMHVQSMLTQLSAKAFLFTFCHHAHLPIREKESEESIAQRRAAFLRQLLGLSEEDSKIV
EYLSELLKMHYLRESGTQLLPVLRFDYIPNFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgataggctctccggacctggtgccttttacaatggaggaggggtatgaagagccattt
catggcgcctctgggctgccggaagaatacacggtgcctctgtttcccttttcccaagcc
aatagcagtccctggtccaggctgtgtgctgccaaattcagcagggactttattctcatc
tcagagttctctgagcaagtggggccccagcctcttcttaccatccctgatgatcagcgg
atttgtggcgagtttgacctgaactacttctccctgcgcatcatgtcggtggactaccag
gcatcctttgtgggccaccccccgggttcatcttacccgaagctgaatttcgtcgaggac
tctaaggtcgtcttgggagactccaaagaaggagcttttgcctatgtccatcacttgacc
ctgtacgacttggaggcgcgaggcttcgtcaggcccttttgcatggcctatatctccatg
gacgaggaaaagataatgagacagttcttggagctttccagcgacttctcaaaagcgtcc
aagtgcctgaaaaccggcaataggaaggcgtttgccaacgagctggaaaaaaagctccga
gaccttgattacaccaggaccgttctacagagagaaatggaagaacagatgaaggccgac
gacaagggattttacacgacacaaaccatcgataaagccaacgaacttgccagtgtggaa
aaatccattatagagcatcaggatttactgaagcagatccagttatacccgtacaggaaa
ataaaagagccggattttcagccgtatgagccagaaagtttacaagactccgatgttccg
aatgaatctgagcaaccattgcccccttctaacccagaagaaagcctggtggaagaggag
agcagtctttaccatcccaggtcatcctacactcctaaattcataaaggcaaaatcctca
aaatgttttgataagaaattaaaaacattggaggaactggttgatatttatttctttact
caaacaatagacctactgactagtatagaaaaacgataccggggtgacttgagttatctc
ctaatgaagcaacttgaaaagggacttttagagcaacagacggtttccaatttcttgttt
gaagatattgcgacttgggatgcaaagctgtccagcatgcattgttccaatactttggcg
cttgttcaggctttgcagaatcctacatttttggaagaaccgggaaaccttaaaaattca
gcaagtctggagtcgtacaaatcaagcgtggaatctgtccctattaaaattgaacaggaa
gtatttgaagaaggaaatcatcaagagacggctgagcgcggtgtttccgacatcccagat
aactgtgaatttaacgatgtggattttaaagggagtgttagtagcagcgacagcattgaa
gtcttgagaacagagaagtcagttgcgttgctcactcattctgagagccagccatgtttg
cgacttagcccccaaccgcccaggaggaaggtaggtagcagaagaaccattagtgaggac
agtattgaagttctaagcacgtgtccctctgaaagtgtaattcctgaggattttagacca
gcatatcaaatcgccattcatgaagaggatcctgatggagtagatgtggatggagaacag
ccttgcaattccaccaataatgaggagaatgagccttctccaaatgatttatcaggcgac
ccagcttgttgcatgggggcagaaacacttttagcgcagacaggaaatgtgacccctgta
cctaatgatggggacattaataaagtggttagtgtcccgccacagtcgtacagaaacatg
gatcatgcctttcaagtcaagttctcagtagacagggctgagaaccattctaataaagtg
agtccccatggcctctctagtcctgaagcagagtcaacatacttaatgagtagcggagag
tctgtaagactaagcattgaggagtattcggactctacaagttatagaagcagcacgtcg
acttgttctgataggacaccctccccggccccatgtgtcagtggcctctctgaacgacat
agaaggaaagccggccagaatgcactaatgttcattagacagtaccccttctcccaccct
gccatatattctcttctctgtggaaggaccctcatagtgctgggtgaggaggaagccttt
gttagaaggcttgtgacggcactatcaatttttgtgcccaatcatggacatgttgccaaa
cccgttaacacatggatgacttccccactgcacataatggattttcagaagtggaaacta
attggacttcaaagagggggttctccgtccagtaccaacatcctgcactccttgaaccgc
tacagccgctacgccagcgtgttggacgcagaccataaaacactacgctgccccgtatat
aaaggagccttcctgcagagactggctgatcaccgcacacagatcaggcggggcagtacc
tactacatgcatgtgcaaagtatgttgactcagctcagcgctaaggccttcctcttcact
ttttgtcaccacgcgcacctccccatccgggaaaaagaaagcgaggagtccatcgcccag
cgcagagccgccttccttcggcagctgctcggcctctccgaggaggacagcaagatagtg
gaatatctctcagagcttctcaagatgcattatctgagggaatcagggacccagctcctc
ccagtgctcaggtttgactatatccccaactttttatacaagatctaa
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