Xenopus tropicalis (tropical clawed frog): 100486895
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Entry
100486895 CDS
T01011
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00514
Other types of O-glycan biosynthesis
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100486895 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100486895 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
100486895 (rfng)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
100486895 (rfng)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
100486895 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
100486895
NCBI-ProteinID:
XP_002937356
Xenbase:
XB-GENE-483389
UniProt:
F6W6M2
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Position
10:complement(27381392..27393701)
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AA seq
364 aa
AA seq
DB search
MKTTYIGHSKVCFLVSLFLCATVLLNISWRQRDSSQSLLQCNSTCSHKYLKPKLKEAHLT
DQHKKWETFRLNTKPASGTGQGYKHFVKEPLQIKDLFIAVKTTKKYHRNRLNLLMQTWIS
RAKEQTFIFTDWEDQELRQKAGDHMVNTNCSAVHTRQALCCKMAVEYDKFVLSDKKWFCH
LDDDNYLNLPALLDLLSAFSHNTDVYVGRPSLDHPVETVDRMKSDGSGPLKFWFATGGAG
FCISRGLALKMSPWASMGNFISTAEKVRLPDDCTIGYIIEGMLEVKMQHSTLFHSHLENL
QRLPPKSLLKQVTLSYGGPDNKWNVVRVSGAFSLADDPTRFKSVHCLLYSDTDWCPNHKH
KPSA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccacttacattggccacagtaaagtttgcttcctggtgtccctgtttctctgt
gccacagtactcctgaatatttcatggagacagagggattcctcacaatctctgctacag
tgtaattcaacttgttctcacaagtacttgaaacctaagttgaaagaagctcatttaact
gatcagcataagaaatgggagactttcaggttaaatacaaaaccagcttctggaacagga
caagggtacaagcactttgtgaaggagccattacagataaaagatttgtttattgcagta
aaaaccacaaagaaatatcacagaaaccgactgaatcttctcatgcaaacctggatctcc
agagcaaaagaacagacgtttatatttacagactgggaagaccaagaacttcgacaaaaa
gcaggagatcatatggtgaacacaaactgctctgcagtgcacacacgtcaagcgctctgt
tgcaagatggccgttgaatatgacaaatttgttttatcagataaaaagtggttttgtcat
ttagatgatgacaattatttgaatctgcctgcacttctggatctgttatctgcattctca
cataacacagatgtttatgttgggaggcccagtttggatcatccagttgaaaccgtggat
agaatgaaaagtgatggctcgggccctctgaagttctggtttgcgactggaggtgctgga
ttctgtatcagtcgaggtcttgcacttaagatgagcccttgggcaagcatgggaaacttt
atcagcactgctgagaaggtgcgtctccctgacgactgcactataggctacataatcgaa
gggatgctcgaggtgaagatgcagcacagtaccctgttccactcacacttggagaatctg
cagagacttccacccaaatctttactaaagcaggtcactttaagctacggtggcccagat
aacaaatggaatgttgtgagagtgagtggagcttttagtctggcagatgatccaacaaga
tttaagtcggtgcattgtctcctgtattcggacacagactggtgccctaaccataaacac
aagccatcagcctaa
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