Xenopus tropicalis (tropical clawed frog): 100487433
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Entry
100487433 CDS
T01011
Symbol
smpd1
Name
(RefSeq) sphingomyelin phosphodiesterase
KO
K12350
sphingomyelin phosphodiesterase [EC:
3.1.4.12
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00600
Sphingolipid metabolism
xtr01100
Metabolic pathways
xtr04142
Lysosome
xtr04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
100487433 (smpd1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100487433 (smpd1)
09143 Cell growth and death
04217 Necroptosis
100487433 (smpd1)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
100487433 (smpd1)
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Motif
Pfam:
Metallophos
ASMase_C
Motif
Other DBs
NCBI-GeneID:
100487433
NCBI-ProteinID:
XP_002943546
Xenbase:
XB-GENE-997694
UniProt:
A0A1B8XW41
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Position
2:179975097..179984220
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AA seq
582 aa
AA seq
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MHSVRGFLAVMIFASVASGLPVPDKLLAPPTLHSYLHQLGAGYGWRNLTCPICKVLFAAL
DISLEVDSNKEMVASLAERVCMALRLAEPSVCQQTIQLFKKDIITAWVLSVLRPSEICGL
LVGADCGVWDIGSNWNISLPNKPKPPVVPPVPPTPGSPVSRVLFLTDLHWDRQYLPGSSA
SCQEPLCCRMPPAHNQSGAGYWGTYSKCDLPLHTIESLLRQVSAQGPYQAVYWTGDIPAH
NVWQQTRADQLDALRTLTGLIRKYLGAVPVYPAVGNHESTPVNSFPPPYVQGNLSSHWLY
HSMAQEWHHWLPQSALSTLRTAGFYTVPIGPRLRLVSLNMNFCDLGNFWLLINYTDPAGQ
LQWLVEVLQEAEEKGEKVHIIGHIPPGLCLKSWSWNYYRIVNRYESTIAAQFFGHTHLDE
FEMFYDEETLTRPVSVAFISPSVTTFINLNPGYRVYQIDGEYPESSHMVLDHETYILNLT
EANARPGQDPRWTLLYRALETYGMKSAFPADWELLTRRFLQDERLFQTFWYLHHKGHVDE
VCQENCKTTLLCALRSGRSSDPELCKDLLLPGKPLWERKQFC
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcattccgttagggggttcctcgctgtgatgatttttgcctcagtggcatccggtttg
ccagtcccagacaagttacttgccccccccacactgcactcctacttgcaccagctgggg
gcaggctatgggtggcgcaatctcacctgccccatctgcaaagtgttgttcgctgccctg
gatatcagcctggaggtagacagtaacaaggagatggtggcctcgctggcagagcgggtg
tgcatggcgctgcggctggcagagcccagtgtgtgccaacagaccattcagctctttaag
aaggatatcatcacggcgtgggtcctgtcggttctgcgcccgtcggagatctgcggctta
ttggttggcgctgactgtggggtgtgggacattggctcaaactggaacatttctttgccc
aataagcccaaacccccagtggttccgcccgtgccccccacgcctggctctcctgtgtcc
agagtccttttcctaacggatctgcactgggaccggcagtacctgcccgggagttctgcc
agctgccaggagcctctgtgctgccggatgcccccagctcataaccagagcggggcaggg
tactggggcacctacagtaagtgtgacttacccctacacaccattgagtccctgctgcgc
caagtctctgcccaggggccctaccaggcggtgtattggactggcgacatccccgcccac
aacgtgtggcagcaaacacgcgccgaccaactggacgctctaaggaccctcactggtctc
atccgcaagtacctgggcgctgtgcccgtgtacccggctgtgggcaaccacgagagcacc
cccgtcaacagcttcccacctccttatgtgcaagggaacctgtcctcccattggctgtat
cacagcatggcacaggagtggcaccactggctgccccagtctgccctcagcactctcagg
actgcggggttctacactgtgccaattggcccccggttgcgcctggtgtctctgaacatg
aatttctgtgatttggggaatttctggctgctgattaattacaccgacccggcggggcag
ttacagtggttggtggaggtgttacaggaggccgaagaaaagggagagaaggtccatatc
attggccacatcccccccgggctctgcctcaaaagctggagctggaattattatcggatt
gtgaacaggtatgagagcaccattgctgcacagtttttcggacacacccatttggatgaa
tttgagatgttttatgatgaggagactctgacgcgccccgtgtctgtggcgttcatttct
cccagcgttactaccttcataaacctgaacccaggctaccgcgtgtaccagatagacggc
gagtacccagagagctcccacatggtgttggaccacgagacctacatactgaacctgacg
gaggccaatgcccggccgggccaggacccccgctggaccctactataccgcgccctcgag
acctacggaatgaaatcggcatttccagccgactgggagctgcttactcgccggttcctg
caggatgagaggttgtttcagaccttctggtacctgcaccacaagggccacgtggacgag
gtgtgccaggagaactgtaagactacgctgctgtgcgccctccgctccggcaggtcctcg
gaccctgagctgtgtaaggacctgctcctccctgggaagcccctctgggaaaggaaacag
ttttgctaa
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