Xenopus tropicalis (tropical clawed frog): 100488113
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Entry
100488113 CDS
T01011
Symbol
phc1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100488113 (phc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xtr03036
]
100488113 (phc1)
Chromosome and associated proteins [BR:
xtr03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
100488113 (phc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
100488113
NCBI-ProteinID:
XP_031761253
Xenbase:
XB-GENE-1013248
UniProt:
F6TCW7
LinkDB
All DBs
Position
7:7976881..7994580
Genome browser
AA seq
852 aa
AA seq
DB search
METESEQNSSSTNGSSASGSSTRPQISQMSLYERQAVQALQALHRQPNAAQYFHQLMLQQ
QLSNAQLHSLAAVQQATIAASRQAASPNTGSAQQTNTTQGSQANLSTSSSAQLLSRTQNV
TAPSATTLTQSVLLSNASSPPLGQSQTQMYLRQPQLGNLLQVNRSLGRGVPLNSQLILMP
NGSVAVQQEVTSPQNQGVHQDSDQVQNLAVRGQQTAATTSAAGATISQPAPLATKPQIHP
ASSAAPTQIPSPNVPQSVKNPVGSTGGTVSQGSQTEAEGRKADGEGVQQSVGINLTRAAT
PAPNQTLISSATYTHIQPHSVLQQKQVVFQQQIAIHQHRQSQLLHASTHLQLAQPQAATQ
QGLQTPGTQQTLVVQPMLQATSESAIPTKAPVPIQPKQPGKGVPPLNLQGHLGAKASQGT
RPLPIPSPSQPHIPVQLVGARQQGPAQALALGATQVPSQASSMTQLTLPPSPAPVASVVA
GAVQESQAGFYGVLQGKLSGPGKRKAEVEDDRDDPSVLPVKASPPTDAPPTVEETSTPAD
KPEAATQVSPTLTVLAPTSVPALSISSRQHSDSKPPQAIVKPQILTHIIEGFVIQEGAEP
FPVGSPQLLKEPEKQAASDTVLLPPAESPPPQAVGDTAASDSGSSKLLKCEYCGKYAPAE
QFRGSKRFCSMTCAKRYNVSCSHQFRLKRKKLKELQEAGGVRARRRGPRRNSSEIARAKI
QGKRMREDSSRGSDNSSYDEAFSPNSPAPPSCRTPHGDRDGSTPTGGPSNSDLLGINPMF
LSSNPSRWSVEEVYEFISSLQGCQDLAEDFRSQEIDGQALLLLKEEHLMSALNIKLGPAL
KICAKINLLKET
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagagagtgaacagaactccagctcaaccaatgggagctcagcgtcggggagc
agtacgcgccctcagatatcccagatgtccctgtatgaacggcaagctgtacaggccctg
caagctctccacagacagcccaatgctgctcagtattttcaccagttgatgctacaacag
cagctgagtaatgcgcaactacacagcctggcagccgttcagcaagcaaccatagctgcc
agtcggcaggccgcatcccctaacacaggctccgcccagcaaacgaacaccacccaggga
tcgcaggctaacctttccacaagctcttcagcccagctcctgagccgtacccagaatgtc
accgcccccagcgccactaccctcacacagtcagtgttgcttagtaatgccagctcgccg
cctcttggccagtcacagacacagatgtacctgcgccagccacagctagggaaccttcta
caggtcaaccggtctcttgggcgtggggttccactgaactcgcagctcattttaatgccc
aatgggtcagtagctgtccagcaggaggtgacatctccccagaaccaaggagtgcatcag
gactcggatcaagttcagaatcttgctgttcggggccaacagactgcggcaactacttca
gcagcaggagctacaatctcccagccagctcctctggctaccaaaccccaaatccaccca
gcctcctcagccgcaccgacacaaattccatctccgaatgtgccacagagtgtaaagaac
cctgtagggtccacagggggtacagtgagtcaggggagtcagactgaggcagaggggcga
aaagctgatggagaaggggtacagcaaagcgttggaatcaacctcactagagcggcaaca
ccagctcctaaccagactctcatcagctccgccacgtacactcacatccagccgcactcg
gtgctgcagcagaagcaagtggtctttcagcagcagattgctatccatcagcacagacag
tcgcagctgctccatgcttctactcacctccagctcgctcagccccaggctgccacccag
caaggcctacagacccctggaacccaacaaaccctggtggtgcaaccgatgctgcaggca
actagcgagtctgctatccccactaaagctcctgtacccatccagcccaagcagcccggc
aaaggcgtgcctcccctaaatcttcaaggtcacctgggggctaaagcgtcccaaggcacc
aggccccttcctataccttcccccagccagcctcatatccccgtacagctggtgggtgcc
agacagcaaggcccggcccaggcattagccttgggggccactcaagttccctcacaagca
tcctccatgacacagttgactctgcccccttctcctgcccctgttgcttctgtggtggcc
ggcgcagtgcaggaaagccaagctgggttttatggagttctgcagggaaaactatctggt
ccagggaagaggaaggcagaggtagaggatgacagggacgatccctctgtgctgcctgtc
aaagcatctccgcccactgacgcccccccaactgttgaggagaccagcaccccagccgat
aagccagaggccgccacccaggtctcccccacccttacggttttggctcccaccagtgtc
cctgccctgtcaatatcttcccggcagcatagcgactccaagcctccccaggccattgtc
aagccgcagatcctgacacacatcattgagggttttgtaatccaggagggggcggagcct
ttccctgtaggcagccctcaactgcttaaggagcctgagaagcaggctgcatccgacact
gttctactacccccggcagagagtcccccgccacaggctgtgggagatacagcagccagc
gattctggaagctccaagctcttaaaatgcgagtactgtggaaagtacgcccctgccgag
cagttccgtggatccaaaagattctgttccatgacttgtgccaaaagatataacgtcagc
tgtagccaccagttccggctgaaacgaaagaaactgaaggagctgcaggaagcaggaggg
gtgagagctcgaaggcgcggccctcgcaggaacagctccgagatcgcacgagccaagatc
caagggaagaggatgcgggaggattccagcagggggtccgacaattccagctacgacgaa
gccttctctcccaactctcctgccccgccatcttgcagaacgccacacggtgacagagat
gggagcacgcccacgggtggaccctccaactcagaccttctgggcatcaatcccatgttc
ctctccagtaaccccagccgctggagtgtcgaggaggtgtacgagttcatctcatctctg
caaggttgccaagacttagccgaggacttccgctcccaagagatcgacgggcaggcatta
ctgctgctgaaggaggagcatctcatgagcgcccttaacattaaattaggacctgcgcta
aaaatctgcgccaaaatcaacctgctcaaggagacctaa
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