Xenopus tropicalis (tropical clawed frog): 100489038
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Entry
100489038 CDS
T01011
Symbol
cd40lg
Name
(RefSeq) CD40 ligand
KO
K03161
tumor necrosis factor ligand superfamily member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04060
Cytokine-cytokine receptor interaction
xtr04514
Cell adhesion molecules
xtr04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
100489038 (cd40lg)
04514 Cell adhesion molecules
100489038 (cd40lg)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100489038 (cd40lg)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xtr04052
]
100489038 (cd40lg)
04090 CD molecules [BR:
xtr04090
]
100489038 (cd40lg)
Cytokines and neuropeptides [BR:
xtr04052
]
Cytokines
Tumor necrosis fators
100489038 (cd40lg)
CD molecules [BR:
xtr04090
]
Proteins
100489038 (cd40lg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Sec16
Motif
Other DBs
NCBI-GeneID:
100489038
NCBI-ProteinID:
XP_002932670
Xenbase:
XB-GENE-489737
UniProt:
A0A803KAB2
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Position
8:69112612..69132258
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AA seq
277 aa
AA seq
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MMINSYNQSPPAHMSQQASSSTMKTTMWIFTLFILAQIIGTSIFGVYFYKKLDKMEEEMS
FSADYLFLRRIQKCMKGDNVDPTLLNCKEVLAKFRQLISEIIKTDTPGEKLEYLKDPNVS
TDKPKDNDNLPKQESEQPVIAAHLVGEKSNNKEVLQWMEKGYSSMCKQITYTNGKLKVEK
AGIYYVYSQVSFCMNSPQQSRAPFVQYIYLSRPQETDKLLLKGANTFITPTPNCALHSLQ
QGAVFALKENDLLFVNVTDSSLVNYSPGLTYFGMFKL
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcaactcatacaatcaaagtcctccggcacacatgtcccaacaagcatcctct
tcaaccatgaagacaaccatgtggattttcactctctttattcttgcacagattattggg
acctctatctttggcgtgtacttttacaagaagctggataagatggaagaggaaatgagt
ttcagtgccgactacctttttctgagaagaatacagaaatgcatgaagggggacaatgtt
gatccaacattgttgaactgcaaggaggtgctggctaaattccgccaactcatatctgag
atcatcaaaacagacacgccaggagaaaaactcgaatatcttaaagatccaaatgtttcc
acagacaagcctaaagataacgacaacctaccaaaacaagaatcagaacagccggtgatt
gcggcacatcttgtgggagaaaaaagcaacaacaaagaagttttgcagtggatggaaaag
ggttattcatcgatgtgcaagcagatcacttatactaatggtaaactgaaagtggaaaaa
gctggcatttactatgtctactctcaagtcagtttttgcatgaattcaccacagcaatcc
cgtgcacccttcgtgcaatacatctatttgagcagaccacaggaaacagacaagttgttg
ctgaaaggagcaaacacgtttatcacgccaacaccaaactgtgctttgcactcattacaa
caaggagctgtatttgccctgaaggaaaatgatctactatttgttaatgtgacggattca
tctcttgtcaattacagtcctggacttacatactttggcatgtttaaactctga
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integrated database retrieval system
