Xenopus tropicalis (tropical clawed frog): 100490905
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Entry
100490905 CDS
T01011
Symbol
trpc3
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100490905 (trpc3)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100490905 (trpc3)
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
MFS_4
EST1
Motif
Other DBs
NCBI-GeneID:
100490905
NCBI-ProteinID:
XP_002941939
Xenbase:
XB-GENE-1014039
UniProt:
A0A803JVP3
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Position
1:66726874..66790754
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AA seq
917 aa
AA seq
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MSYKGRKCKELPAARVSFPDIGERGSWLARNGGQWAPLPQPRGVLVLPAESSSFMAGGSH
SDCYRFHSTSGDGSPSMRRVTMIREKGRRQAVRGPAFMFNNRGPNLTAEEERFLDAAEYG
NIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVSELLLKKDNLARIGDALLLAI
SKGYVRIVEAILNHPAFAASKRLTLSPCEQELQDDDFYSYDEDGTRFSPDITPIILAAHC
QKYEVVHMLLVKGAKIERPHDYFCKCSDCTEKQKHDSFSHSRSRINAYKGLASPAYLSLS
SEDPVHTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGD
VDAEPIESQRHRPSLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQPIAIKCL
VVLVVALGLPFLAVGYWIAPCSRLGRILRSPFMKFVAHAASFIIFLCLLVFNASDRFEGI
KTLPNITVIEYPKQIFRVKTTRFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQLWNV
LDFGMLSIFIAAFTARLLAFMQATKAQQYVDKYIQENDLSLVTLPPEIEYFTYARDKWLP
SDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAF
MIGMFILYSYYLGAKVNSAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGYVLY
GIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFSIVP
SPKSFVYFILKIINLFKCRRRRLQKDTEIGMGDSKSRLNLFSQSTTRVFESRSFNSIINQ
PTRYQQIMKRLIKRYVLRAQVDKENDEVNEGELKEIKQDISSLRYELLEDKSQATEELSS
LIHKLSEKLNPGMLRCE
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcatataagggcaggaaatgcaaggagctgcctgcagcaagggtcagcttcccggac
attggggagcgtggaagctggctagcaaggaatggggggcaatgggctccgctacctcag
cccaggggagtgctggtgctgccggcagagagcagctcttttatggccggtgggtcccac
agtgactgttatcgatttcactccacgtcaggtgatggtagcccttctatgaggcgtgtt
accatgataagggagaaaggaagaagacaggcagtccgaggcccagcatttatgttcaat
aacagaggcccaaatctcacagcagaagaggaacggtttctggatgcggcagaatacgga
aacatccctgtagtaagaaaaatgctggaggaatctaagaccttgaatgtcaattgtgtt
gattacatgggtcaaaatgccctgcagctagcagttggaaatgaacatttagaagtcagt
gaactgttactcaaaaaggacaacttggcacgaattggtgatgctctactgcttgcaatc
agcaaaggctatgtgaggatagtagaagccattttaaaccatccagcatttgctgcaagc
aaaagacttacccttagcccatgtgaacaggaactgcaggatgatgacttttattcctat
gatgaagatggaacacgattctccccagatataacacccattattcttgcagctcattgc
caaaaatatgaagttgtgcacatgctgttggtaaaaggcgcaaagatagaaaggcctcat
gattacttctgcaaatgcagtgactgcactgaaaagcaaaagcatgactctttcagtcac
tcacggtccaggataaatgcttacaaaggattagcaagtccagcctatctatcactttct
agtgaagatccggtacatacagcactggaacttagcaatgagctggcaaagttggccaac
attgagaaggaattcaagaatgactatcgcaagctctctatgcaatgcaaggattttgtg
gttggtgttcttgacctgtgtcgagattctgaagaagtagaggccatcttgaatggtgat
gtggatgccgaaccaatagaatctcagagacaccggccctctttaagcagagttaaattg
gcaatcaagtatgaagtgaaaaagtttgtggctcatcccaattgccaacagcagttgctg
accatctggtatgaaaatctctctggattgagagaacaacccatcgccatcaagtgtcta
gttgtactggtcgttgcactagggcttccttttcttgctgttggttactggatcgcacca
tgtagccggcttggcagaattcttcgcagtcccttcatgaagttcgtagctcatgctgca
tcatttattattttcctgtgcctgttagtgttcaatgcctcagataggtttgaaggcatt
aagactctgcccaacattacggtcattgaatacccaaagcagatttttagggtgaaaaca
acaagatttacctggacagagatgctaattatggtatgggttctaggaatgatgtggtca
gagtgcaaagagctgtggctggaaggacccagggaatacattctgcagctatggaatgtg
ctggactttgggatgctctccatctttattgcagcctttacagccagacttttagccttc
atgcaagccacaaaagcacaacaatatgtggacaagtatattcaagaaaatgatctttcc
ttggtcacgctgccacctgaaatagaatactttacatacgctagagacaaatggcttccg
tccgatccacagatcatatcagaaggcctttatgccatagcagttgttctcagcttctca
cgcattgcctatatattgccagcgaatgagagctttggaccactgcaaatatcacttgga
agaactgtaaaagacatttttaaattcatggttctttttattatggtgttccttgcattc
atgattgggatgtttatcctgtattcttattatcttggtgctaaagtgaattctgcattt
acaacagttgaagaaagttttaagaccctcttctggtccatatttggcctgtctgaagta
acatccgttgtactaaagtatgatcacaaattcattgagaacattggctatgtcctttat
ggaatctacaatgtaacgatggtggtagttcttctaaacatgttaattgccatgattaac
agctcctatcaagaaatagaggatgacagtgatgtagaatggaaatttgcccgctccaag
ctatggttatcttattttgatgatggaaaaacgctgcctccacctttcagcatcgtgcca
agtccaaaatcctttgtgtactttatcctaaaaatcattaacttgttcaagtgcagaaga
aggcggctgcagaaagatactgaaataggaatgggagactccaagtctaggctaaatctc
ttctctcagtctactacaagggtttttgagtctcgcagttttaacagtataattaatcag
ccaacacgctatcagcaaataatgaaaagacttataaagagatatgtgttgagagcacaa
gtggacaaagaaaatgatgaagtaaatgaaggtgaattgaaggagataaaacaagatatc
tccagccttcgctacgaacttttagaagacaaatcgcaagctacggaagagttgtcctct
ttgattcacaaactaagtgaaaagctaaatccgggaatgctgagatgtgagtga
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