Xenopus tropicalis (tropical clawed frog): 100491139
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Entry
100491139 CDS
T01011
Symbol
trpm2l
Name
(RefSeq) transient receptor potential cation channel subfamily M member 2 isoform X1
KO
K04977
transient receptor potential cation channel subfamily M member 2 [EC:
3.6.1.13
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100491139 (trpm2l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100491139 (trpm2l)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.13 ADP-ribose diphosphatase
100491139 (trpm2l)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100491139 (trpm2l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
LDcluster4
Motif
Other DBs
NCBI-GeneID:
100491139
NCBI-ProteinID:
XP_031753324
Xenbase:
XB-GENE-6257461
UniProt:
A0A803JG29
LinkDB
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Position
2:180723763..180804549
Genome browser
AA seq
1497 aa
AA seq
DB search
MGNTKSKSPVPDRIDGVQLHSTVGSPYRPGTADPKKKKKTAPKFIDGEKVDVLNSWVTRN
IRKKECVAFIPPAPEAPGDRDTCGCGHTRRTHFAAQVSAPLEPGTVWDPHKHVREFPSDA
HGDLTFTGTTRTWAKYVRASNDTPPRSLFDLMTQQWDLRVPNLLISVTGGAKNFNISPRL
KTEFSRGLVTAAQSTGAWIITGGSHAGVMKHVGEAVRDFSGGQHETEIVLIGIATWGIVH
NRESLISEAGGAPAVYPMDEGSQGALCCLDNNHTHFILVDNGTYGKYGVEIPLRTKLEKF
ISEQTMENAGTAIKIPIVCVVLEGGPGTLDTIYNSMCNNTPCVIVEGSGRVADIIAQVAN
LSISQITISVVKEKLQNLFQDTFESFTEAQIIMWTKKIQDIVRMGSLLTILREDKTEEQG
MDVAILQALLKASRSTDYSGQENWDHQLKLAVAWNRADIAESQIFTEDWMWKPSDLYPSL
MVSLIDDKPSFLRLFLERGVSLSEFITWDMLTELYNNTEPSSLIHSKLERQAMLDESTEM
NGGLKIQLHHVSHVLQELLGGLTESLYLDRRSHRTRTLPYINIKISGKVSSMRSECDSTV
KLEHPVRDLLIWCIVQNRAELAEIIWCQSQDCMVSALACSKMLKALSKEEDDTESMESMK
VLANVYEERAAGVFSECYASDESRAEQLLIRVSSKWGKTTSLDLAQESQGQLFMSQSGVQ
MFLTKTWFGRLSVDNGLLAILLCMLLFPLIYTDLIMYRKESVAPRSSRGQDKRSAARSSR
ARNCLWKFFDFFSAPIVKFYYNVVSYIGFLWLFAYVLMMDFQTYPSWTEYLLYVWVFSIL
CEELRQLLYDPDRLGFVVKSMQYISEFWNQVDTLALSLFAVGLICRLASLNTVYLGRVFL
SVDYMIFCIRLMNIFTVSKVLGPKIIMLRRMIMDLFFFLFLLAIWIVSFGVAKQAILTSN
ETRLDWIFRNVIYGPYLILFGQIPSEVDGLNFDPTKCSQSGTDPTLPKCVYNDGSGKTLF
PEWLTILLLCIYLLMANILLLNLLIAMFSNTFGDVESHTDQIWKFYRFGLIKEYNERPVA
PPPFILLSHLYFLLKYGLSKRSTLSHQAMRSVMDEAGESSLLSWELYMRDNYLHNQQLVD
SQSQENVVKNTAQSVSAVLNLLNMRKDGEGQQLETRLILLEEEVLKSSEQLQWIISALGE
KGFTGRAQRLVHSSSQDSGDSATHGLDPSTERKSIYHVNSRTLQYPDSPVSRYPVPDEMV
PWEVPFPGYEPPFYTAERGDRGAYDPHSEMSQTNRKYNAVDGALDLRSSCGTYAVQDGFP
LNPMGRTGLRGVGSLRWFGPNHSLHLVITRWNTRANGSADKKLPRKMLEVLVVKEKKNEL
WALPGGTLSPGEEIPSKLQSILSQTYGERFSELLRGGREVFRGYLDDPRNTDNSWIETLA
VNIHLDTEETLSQFLQNLNQSSPEVSLRWQILDHKIPIYANEKEILQRTAEVHGTHY
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacacaaagagcaaatcgccagttccggatcgaattgatggggtccaactacac
agcaccgtaggctcaccctacaggcccggcaccgctgatccaaagaaaaagaagaaaact
gctcctaaatttattgatggggagaaggtcgatgtacttaactcatgggtgacccgaaac
atcaggaagaaagagtgtgtggcctttatccctccggcccccgaggcccccggtgacagg
gacacatgtggctgcggacacacaaggcggacacactttgcagcccaagtatctgctcca
ttggaacctggaaccgtgtgggacccccataaacacgtccgagagtttccctcagatgcc
cacggagacctgacattcacaggcacaaccaggacttgggcaaagtatgttcgtgcctcc
aatgataccccccctcgatcgctctttgacctgatgacccaacagtgggacctgcgcgtc
cctaacctcctcatttctgtcaccggaggagccaagaacttcaacatcagccccagactc
aaaaccgaattcagccgggggctggtcacagcggcacagagtactggcgcctggatcatc
acaggagggtcccacgcgggggtcatgaagcacgtgggagaggctgtgcgggactttagc
ggtgggcaacacgagactgagattgtgctgattggcattgccacctggggcatcgtgcac
aacagggagtccctgatcagtgaggcgggaggagcccccgctgtctatcccatggatgag
gggtcgcagggggcgctgtgctgcctggacaataaccacacgcatttcattctggtcgat
aatggaacatatgggaaatatggcgttgagatcccactgagaaccaaactggagaaattc
atctctgagcaaacgatggagaatgcaggaacagccataaagatccccatagtgtgtgtg
gttctggaaggggggcccgggaccctggataccatctacaattccatgtgcaacaacact
ccctgtgtcatagtggagggctctgggcgcgtggctgacatcattgcccaagtggccaat
ctgagtatttcccaaatcaccatctctgtggtcaaggagaagctgcagaacctgttccag
gacacgtttgaaagcttcactgaggcccagatcatcatgtggactaaaaagattcaggac
attgttcgtatgggctctctcctcacaattctccgggaagacaaaactgaagaacagggg
atggacgtggcgatacttcaggctttgctgaaagcttctcggagcaccgactactctggg
caggagaactgggaccatcagctgaaactggcagttgcctggaaccgggcggatatagcc
gagagccagatattcactgaagactggatgtggaagccttcggacctgtatccatctctg
atggtctcgctaattgatgataaaccttcgtttcttcgcctgtttctggaacgcggtgtg
agtctgtctgagttcataacgtgggatatgttaacggaattatataacaacaccgagcct
tcaagtctgatacacagcaaattggagcgacaggcgatgttggacgagtcaacagaaatg
aatggcggcctgaagattcagctccatcatgtgtcccatgttctgcaggagcttctcggg
ggactgactgagtcgctttatctagataggaggtctcatcgcacacggactttgccctac
atcaacattaagatctcaggaaaagtgtcatctatgaggtcagaatgtgattctaccgtg
aaactggagcaccctgtccgggatctgctgatctggtgtattgtgcagaaccgagccgag
ctggcagagatcatatggtgtcagtcacaggactgtatggttagtgccctggcctgcagt
aaaatgctgaaggctctctcgaaggaggaagacgacacggagagcatggagagcatgaaa
gtgttggcgaatgtttatgaggaaagagcagctggagtcttttctgagtgttacgccagc
gatgagagtcgggccgaacaacttctgattcgtgtctcttccaaatggggaaaaacaacc
tccttggacctcgctcaggaatctcaggggcagctcttcatgtcccaaagtggggtacag
atgttcctcactaagacctggtttgggaggctctcagtggacaatgggctactggccatc
ctgctttgtatgttgctcttcccactcatctacaccgacctcattatgtaccggaaggaa
tctgtggcccctcggagcagtcgcgggcaggacaaacgctctgcggccagaagctcccgg
gcacgtaactgtctctggaagttctttgatttcttcagtgcccccatcgtgaagttctac
tataatgtggtctcctacatcggcttcctttggctcttcgcttacgtcctgatgatggat
ttccagacttacccttcatggacagaatatctgctgtatgtttgggttttctccatcctt
tgtgaggagcttcgccagttgctgtacgacccggacaggctgggattcgtagtcaaatcg
atgcagtacatatccgagttctggaaccaggtcgatacattggcgctctcgttatttgca
gtcgggctcatttgtaggttggcaagcttgaatacagtatacctaggccgtgtttttctg
tccgtggattacatgatattctgtattcgccttatgaacattttcacagtcagcaaagtt
ctcggtcccaagatcataatgcttcgtcgcatgataatggatttgtttttcttcctgttc
ctactggctatttggatcgtatcatttggagttgcaaagcaggcaatactgacaagcaat
gagaccaggttagattggatcttcaggaatgtgatctatgggccgtatctgattctcttt
gggcagattccttctgaggtcgatggcctgaactttgatccaacaaaatgcagtcagagc
ggcacggaccccaccctgcccaaatgcgtgtacaatgatggttccggaaaaactctcttc
cctgagtggctgacgatccttctgttgtgcatttacctgctgatggccaacatccttctg
ctgaatcttctgattgctatgttcagtaacacgtttggagacgtagaaagccacacggat
cagatctggaagttctaccgctttgggctgataaaggaatataatgagcgccccgtggct
ccgcctcccttcattctgctgagtcacctctatttccttctcaagtacgggctgagcaag
cgctccaccctgagccaccaagccatgagatctgtaatggatgaagctggagaatcgtct
ctgctctcctgggaattgtacatgagggataattatctgcataaccagcagctcgtggac
tcacagagtcaggagaacgtggtcaagaacacggcccagagtgtatcggcggtgctcaat
ctgctcaatatgaggaaagacggtgaggggcagcagttggagacgaggctcattttactg
gaagaggaggtattgaaatcctcagagcagctccagtggatcatctcagccctcggtgag
aaaggatttactggtcgagcccagagacttgttcacagcagctcccaggactcgggggac
agcgccacccatgggttggatccttcaacggaaagaaagtccatttatcatgtgaatagc
agaaccctgcagtaccccgactccccggtgagccgttacccagtcccggatgaaatggtg
ccttgggaggttccattcccgggctatgagccccccttctacactgcagagcggggcgac
cgcggggcctacgatccccattccgagatgtcacagaccaataggaaatacaatgccgta
gatggggcgctggatttgcgaagctcctgtggtacatatgctgtacaggacgggttccca
ctgaacccaatgggtcgaacaggtttgagaggtgttgggagtcttcgttggtttgggcca
aatcattctctgcacctggtaataacgcggtggaatacacgggccaatggctccgcagac
aaaaagcttcctcggaagatgctggaggtgttggttgtgaaagaaaagaaaaacgaactg
tgggcgctgccaggggggaccctgagcccgggagaagagatcccttccaaactccaatct
attctcagtcagacgtatggagagcgattctcagagctgctccgaggggggagagaggtg
ttccggggatatctagatgacccgaggaacacagacaattcctggattgaaacactggct
gtgaatattcatctggacacggaggaaacactcagtcaattcctacagaatctgaaccaa
tccagcccggaggtttctcttcgctggcagatcctggatcacaagatcccaatctacgct
aatgagaaggaaatcttacagagaacagcggaagtgcacggaacacattactga
DBGET
integrated database retrieval system
