Xenopus tropicalis (tropical clawed frog): 100491541
Help
Entry
100491541 CDS
T01011
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100491541 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
100491541 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100491541 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
100491541 (plekhm1)
Membrane trafficking [BR:
xtr04131
]
SNARE
SNARE associated proteins
Others
100491541 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
100491541 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
Cytochrome_C7
Motif
Other DBs
NCBI-GeneID:
100491541
NCBI-ProteinID:
XP_002933223
Xenbase:
XB-GENE-6033729
UniProt:
A0A6I8SJK7
LinkDB
All DBs
Position
10:37760313..37780427
Genome browser
AA seq
1061 aa
AA seq
DB search
MLSSLTSENAQEPKEVKQRITKKLATSLRALQIRYVTTDDVVTSDDDDANALCVALEAVF
IHGLKPKFIKAQTDKRNRRYKGRHVPLPQPAYWALLKAVTHRNVITELERVSYINTDVGR
CRSWLRLALNDCLMECYFISLQREKSWLTEYYQPFALLLDAEDCDVVLSYLQGFASLTFS
LSYKSSILNEWTATPLSLAGLWLDDSDRFTNGQYETHRRKSLDSVSQSSSSDDTNSSLLS
ESKGKMDSPLNLDTNSASLQFSSSLSSEGLLHNRTTSSGIHSGSENSSCDADSAEMEESD
KSHAEESEFDVSLLSGRNSPTVFLPTPHSGEVVSQPEKTTPQGIKCQGELDVKETPLTEC
AIKADLITPPASIKAPSSSLCTRSDKPSAPPEQPNPVICQNPTTEESHRGPTFKTSPEND
AHENQIDKLPQAAQINDQADGCIYDKGCSQALEAPPASLASVTSVSKDKSGVCLSVPEHP
IVAELPKSRSWISEDDFQRPELSLPTESTLSAPSIPSQPPSSEISDLSQVNKAFNVVHRR
QIGLSNPFRGLLMMGDLERRALGMYKSFYCELTPIEFRMFLKGEDRVCLENCTLIRCESV
GPVQSDGRFDLNFPAKRFHLRAPSRDEAQDWVDRIREALQKCRPQKDDTWEVLQFPDPPK
TGQESPLLSPQRSPSSPVGSIKTESFDWVCPLKLEPDALKESVLYMKMDKKWTRCIFSLT
ERELRCYLAKNSEKVLHNIFGIEMVRDILPDASLGSPSCFKLVTSKGSLQLQAESSSEAK
HWREMVRDVYLELADELALLAGTASFPIKSHIRGHALFQYLLYIPSEKGLDSQNFKCAAC
HKQIGFQFGKAKHCAYSALYYCEWCHQDEGSVIPSRMVHNWDLTEQAVSRPALKFLNMVL
NEPIINVPSVNSGLYQHSHTMHNISHSREKLRLLAEYLQTCRSGAFQELSKSLDNRTYLL
DCAHTYSVQDFRQIANGEFELFLGAAVDLATKHVYDCDLCSQKGFICQICNQDEIIYPFQ
FETTTRCGDCKSVFHIPCKAEVKQCPRCLRRKKYQVQGVNM
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgctttcgtctctcacctcggagaatgcccaggagcccaaagaggtgaagcagagaata
accaagaagttggccacttctctccgagctctccagatccgttatgtgactacggatgac
gtggtcaccagcgatgatgacgatgcgaatgctctgtgcgtggcgctcgaagcagtgttc
attcatgggctgaaaccaaaattcatcaaagcccagacggataagaggaacaggagatat
aaaggtcgtcatgtacccctgccccagcctgcctactgggcactgctgaaggctgtaacg
caccgcaatgtgattacagaactggagagggtgagttacattaacactgatgtaggccgc
tgccgctcgtggttgcgtctggcgcttaacgactgtctaatggaatgttatttcatctcc
ttgcaacgagagaagtcatggcttaccgagtattaccagccttttgccttgctgctggat
gctgaagattgtgacgtggtgcttagctacttgcaagggtttgcttctttgactttctct
ctttcatataaatcatccattttaaacgaatggacagccaccccgctgtcattagctggg
ctctggcttgatgactctgaccgctttacaaatggacaatatgaaacccacagaaggaaa
tcgctggactctgtgtctcagtcatccagttcggatgatacaaacagctctttgttaagt
gaaagcaaaggcaaaatggattcccccctaaaccttgacacaaacagcgcttccttacag
ttctcttccagtcttagctctgaggggctgcttcataatcggaccacctcaagtggtatc
cactctggttctgaaaactcttcttgtgatgctgactcagctgagatggaggaatctgat
aaatctcatgcagaggaatctgaatttgatgtctctctgctgtctggaagaaactccccc
acggtgtttctacctacgccccactcgggagaggtcgtatctcagccagagaaaactacc
ccacagggcatcaaatgtcaaggggaattggatgttaaagaaactccactgacagaatgt
gcaataaaagcagatttaataacaccccctgcaagcattaaagctccttcttcaagcctt
tgcacaagaagtgacaagccttccgctcctccagagcaacctaatcctgttatttgccaa
aaccccactactgaggaaagtcacagaggcccaacatttaaaacaagccctgaaaatgat
gcacatgagaaccagattgataagcttcctcaagctgcacaaattaatgaccaggctgat
ggctgtatttatgataagggctgctctcaggcactggaggctcctcctgcctccttggcc
tctgtgacttctgtaagtaaggataagtctggggtttgtctgtctgtcccagagcatcct
attgtggctgaactacctaaaagccgaagttggatttctgaagatgatttccagaggccc
gaactttcccttccaacagaatcaaccctgtctgcaccctccattccctcacagcccccc
agcagtgaaatctctgacctcagccaagtcaataaagcttttaatgttgttcaccgaagg
caaattggcctctccaaccctttccgtggtctcctaatgatgggagacctcgagagaaga
gccttggggatgtataaaagcttttactgcgagctgactcccatagagtttcgcatgttc
ctgaaaggagaggaccgagtctgtttggagaattgcaccctgatacgatgcgaatctgtt
ggcccagtgcagagtgatggccgctttgatttaaattttccagcgaaaaggttccatttg
cgagccccctcaagggatgaggctcaagactgggttgacaggatacgggaagccttacaa
aaatgccgccctcagaaggatgacacgtgggaagttttacagttcccagaccctcccaaa
acaggccaggaaagcccgctcctgtctcctcaaaggagcccatcatctcctgttggaagc
ataaagactgagtcatttgattgggtctgtccattgaaattggagcctgatgcattaaaa
gagtctgtgttgtacatgaagatggataaaaaatggacgcgctgcattttctccttaaca
gaaagggagctgaggtgttacttagccaagaactctgagaaagttttacacaacatattt
ggtattgagatggtgagagacattctgcctgatgccagtctcggaagcccatcctgcttc
aaactggtcacgtccaaaggttctctgcaactgcaggctgagagctctagcgaggccaaa
cactggagggagatggtgcgagatgtttacttggaactggcagatgagctggcattactg
gcgggcactgctagcttcccgataaagtcccacatccgggggcatgcactgtttcagtac
ttgttgtacattccctctgagaaaggcttagactcccagaactttaaatgtgcagcttgc
cacaaacagattggttttcagtttggaaaggccaaacattgcgcttattcagcactttac
tactgtgagtggtgccatcaggatgagggctccgtcattccttcaagaatggtgcacaac
tgggacctcacagagcaagccgtatcgagaccagcattaaaattcctcaatatggtgctc
aatgaaccaatcataaatgtgccgtctgtcaatagcggcctgtatcagcactcgcacact
atgcacaatatcagccacagccgagagaaactgaggctcctggcagaatacctgcagacc
tgtcgtagtggagcatttcaggaactaagcaagagcctggataaccgcacctacctactg
gattgtgcacacacctatagtgtccaggatttcaggcagattgccaacggggaattcgaa
ctgtttctgggagccgctgtggatttggccaccaagcatgtgtatgattgtgatctttgc
agccaaaaaggttttatctgccaaatctgcaaccaggatgagatcatttaccccttccag
tttgaaacgaccaccagatgcggagactgtaaatctgtcttccacataccatgcaaagcg
gaagtgaaacagtgtcctcgctgcctaaggagaaaaaagtaccaggttcaaggtgtaaat
atgtaa
DBGET
integrated database retrieval system
