Xenopus tropicalis (tropical clawed frog): 100492684
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Entry
100492684 CDS
T01011
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3 isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xtr04121
]
100492684 (ttc3)
Enzymes [BR:
xtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100492684 (ttc3)
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100492684 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
zf-rbx1
TPR_BSK1_C
TPR_1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
TPR_11
zf-ANAPC11
TPR_2
TPR_17
PAM2
TPR_12
CARD
Motif
Other DBs
NCBI-GeneID:
100492684
NCBI-ProteinID:
XP_004912171
Xenbase:
XB-GENE-995695
UniProt:
A0A803K447
LinkDB
All DBs
Position
2:complement(12581165..12638060)
Genome browser
AA seq
1887 aa
AA seq
DB search
MGVPGRYCYFPLSRSRIWAGGLPCSFSISAPWDCGWDPSAMDGIGYTDIGNGSSHVIATC
FRGHEYPMQRPPVPVGEKVDPVTFWLSHPLDVIHEHCDLIKVYILWPVLKADASPVYKGP
WVDHDGSGLCIQELNFVEMLEDLLDVVKKVAHERRFIEGLLKIAKTMEMVQLNYQHLSEA
MSWLRSTGELQICKKLEEQDNLSLFPLQILFIDYAHYINSMADQRCSLSFMWKKKHICDC
CAVESEGMKQRGNEEFSKSNFCLAADLYSKAIEYSPDNHLLFGNRSLCFLRMGEYMNALS
DGKKATVLKHKWPKGHYRFCEALFLMGERERALASNEKAQLLCKDSPEGIRDLIQQQTKI
KRKIEEMKDGKHRRSTNKKFIRDKKIAPYSGPMSVLKEKKKIPSSNKEDIPNKESDGATL
ENKDIISDNVTGQNQKKGKSKGKGGESEKLRVSNAKSDPKENQKDVSCNYSQMDLSTLQD
MVKSLVRDGCEALADSRCHNALGYFSKLLDILAASDLQRFYLSNIDYVVLLYGYANALLG
TGQCEELTKAEDQLKKIITQFTKERFNCLAFYGIGNVYYRQNRFSDALNQYVKSHTMVKL
KMMPGILTWPTTPIVLEESRPEKLQSLLENRIEECKFPPKPDAICRYKQCLSLPKPQIYF
TDPDFKGFIRVICCLSCKVEFHVCCWKKLKANNYSDKADRDFLTISCFTPDCKGKISNII
IYDSTGLVKREFADKSVKKKEPQRPTVKNKGSSNKKLKIKPESKTQAKKTSPEENRSLIH
NEKSQKQQENISSNQRNNICNNRYSVAPHDLMMTLILNKEEVFKTGVESTKALCNSLISW
NVISQEELDGFSFETTCRSSSDEMAVLLAHLCSLNNRVKTRIFLYLLEDYPLTLELPAFI
KMIRDTGHRAAKKFQEINSSLLKELNFELLAGRWNETYGKLLNFFMSISVETAEKLSQAN
IQIFRCFIWFLDDNRYVPMPAGLDKYLDKYFIDMDIPYSKNDVLDSVNKDPIEAPCCINI
RMKSDEEQPTKCIKVKNKHKKKKQNQPKTLYKVSGAVSTRPPEDDIFTEENTLSLLDPYE
PFIIPEYLRPDVEEFETLYDPTPGGYRLPWQPDNAMQETLYEYFSEILEEHGPLELDDDI
LIGTFKEFPEEAHQLVQEAGSLKDFLLQSTKFVMVGKLLGLRPHKVILEEASGKAKLNPT
AKEFQPSSNNPFDSIISETLEISPEYNPLEPSNPFVLLPNQSPVFNGNCIVPCLPLYGLN
PLPVVSVGHPFIPGLGIGMQPTITVNSAVMCNLGVPLPNRAKEPEQSSPIMHNTLTGNLN
PKNDTASETTMTQTVPLRRNIHTGVVSVQVDRDLSEQEVNTEPYYPFEVQQGDILRIEKE
HLVLQEQLKEATEKYENLQGRYKEEIAGLHKQIRETADNNKIIKKELEMFNHEMDNDTKK
WQLEKKEYHDKLRVVKSGIKAANETVDKYSREIEEKKQQYEAYIETFVQSGFNIENEKAK
LEKHIKSNEDKLQESKKRAMTAEVHFLENKKQTDLLKLRIMAAKVEHSANKLKANGSATP
FAQKSIADLSPSYLKSESEKIKSQFDEKIKLVESGYKLANIQANNLAAPFNASAFQTPLL
PPSPTPKLPTTKPSTPLPASSSAPPASLKSPLKPTRETKKSKSKDINKDPKPPPPAINPK
ATALAGKGPGAPVMEKKGKPNLEAQHQSPGKPTAFDKIIEELHEIFPDYKSAELTNFIKE
LRNKTGGTLAGMKHDDIVSRVTEYILDSQDKAPPQAPWVQASGNVYPSAVKPQAPSPQPK
QPWRVVTGPSKNKWQKSDDTECYNDEPCIICHDELQQYPVQKLDCGHCFHRHCIKTWLNT
QSTCPTCRDHALLPEDFPALSGRIRTT
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgggggttccggggcgctattgctacttccccctgagtagaagccggatatgggcagga
ggcttgccttgctccttcagcatcagtgccccctgggattgcggctgggacccttcagca
atggatgggatcgggtacacagatattggcaatggaagctcgcacgttattgccacctgt
ttccgaggtcatgaatatcctatgcaaagaccacctgtacctgttggggagaaagtcgat
cctgttacattctggctctctcatccattagacgttatacatgaacactgtgatttaatt
aaagtctatattttgtggccagtccttaaggcagatgcatctccagtgtacaaaggacca
tgggttgatcatgatggttctggcctgtgtattcaagaactaaacttcgttgagatgtta
gaagatctcctggatgtagtaaagaaagtggcgcatgagcgacggtttatagagggctta
ttaaagattgcgaagacaatggaaatggttcagttaaattatcagcatctatcagaagca
atgagctggctgagatcgacaggggaactacaaatttgcaagaaactggaagaacaagat
aatttaagcctctttcctctgcagatattatttattgactatgcacattacataaacagt
atggctgaccagaggtgcagtttatcctttatgtggaaaaaaaaacatatttgtgactgc
tgtgctgtggagtcagaaggtatgaagcaacgtggtaatgaagagttttctaaatcaaat
ttttgcttggctgctgatctgtattctaaagccatagaatatagtcctgataatcatctt
ctatttggcaacagatctctctgcttcttgcgtatgggcgaatacatgaatgctctgtct
gatggcaagaaggctacagttctcaagcataaatggccaaagggtcactaccgtttctgt
gaagccctgtttcttatgggagagcgagagcgagcgcttgcttccaacgagaaggctcag
ctgctttgcaaggacagccctgaaggcatcagagacttaattcagcaacaaacaaagatc
aagagaaaaatagaggagatgaaagatggaaagcatcggagatctactaacaaaaagttt
atccgtgacaaaaagattgcaccctattcgggtcccatgtcagtcttgaaggaaaaaaag
aaaataccatctagtaataaagaagatatccccaataaggaaagtgatggggccacttta
gaaaataaggacattatttctgataatgtaactgggcaaaatcagaagaagggcaaatca
aaggggaaagggggagaatctgaaaaattaagggtatctaatgcaaagtctgatcctaag
gaaaaccagaaggatgtatcatgtaattattcacagatggatctatcaactctgcaagac
atggttaagtcgttagtgcgcgatgggtgtgaggcgcttgcagacagccggtgccataat
gcactaggatatttttctaaattgttggatatcttggctgcatctgacctccagagattc
tatctatctaatatagactatgtggtgctcctctacggctatgctaatgcactgcttggc
actgggcaatgtgaggagctgaccaaagctgaagaccagctgaagaaaattataactcag
ttcaccaaagagaggtttaactgcttggctttttatggcatcggcaatgtatattatagg
caaaatagattttctgatgcattaaatcagtacgtcaaatcacatactatggtaaagctc
aagatgatgccagggattctaacgtggccgactacacctatagtccttgaagagtcaagg
cctgaaaaactgcagtcacttttagaaaaccgtatagaagaatgcaagtttcctccaaag
ccagatgccatttgtcggtataagcaatgccttagtttgccaaaaccgcagatatatttt
acggatcctgatttcaagggttttatccgtgtgatatgttgcctgtcatgtaaagtggag
ttccatgtttgctgctggaagaagctgaaggccaacaactattccgataaagctgacagg
gattttctaactatctcttgttttacacctgactgtaaaggcaaaatctctaatataatt
atttatgactccactggacttgtaaaacgtgagtttgcagataagtctgttaagaagaaa
gaaccacaaaggccaacagttaagaataaaggaagtagcaataagaagttaaagattaag
cctgagagtaaaacacaagcaaagaagacctcacctgaagagaacaggagcttgatacac
aatgagaaatcacagaagcagcaagaaaatatctcctctaaccaacggaataatatatgt
aataaccgttatagtgtagcacctcatgatttaatgatgacgcttatattgaataaggag
gaggtttttaaaacaggagtggagagcaccaaagcattgtgcaactcattaatctcatgg
aatgttataagtcaggaagaacttgatggtttttcctttgaaacaacatgtagatcgtct
tctgatgaaatggcagtcctgctcgctcatctgtgcagcttaaataatagagtaaagaca
agaatattcctctacctgctggaagattatcctttaactttagaactgcctgcatttata
aagatgattagagatacgggtcatcgggcagcaaagaagttccaagagataaacagcagc
ctcctgaaagagcttaatttcgagttgctagccggtcggtggaacgaaacctacggaaaa
cttttaaacttcttcatgtctatatctgtggaaacagctgagaaactaagtcaagcaaat
atccaaatattccgctgcttcatatggtttctagacgacaatagatatgtccccatgcct
gccgggctggataaatatttagataaatattttatagatatggatataccatattccaaa
aatgatgtgctcgactctgttaataaagaccctatagaagccccttgttgcatcaatata
cgaatgaagtcagatgaagagcagcctactaaatgtatcaaggttaagaacaaacacaag
aaaaagaagcaaaatcagcccaagactttgtataaggtttctggtgcagtaagtaccagg
cctccagaagatgacatttttacagaagaaaatactctaagcctgttggatccttatgaa
ccctttataatcccagaatatttgcgtcctgatgtggaagaatttgaaaccctttatgat
cccactcctggcggataccggttaccatggcaacctgataatgccatgcaagaaaccctc
tatgaatatttttctgagatcctggaagagcatgggcctttggaactggatgatgacatt
ctgattgggacatttaaggagttcccagaggaggcacaccagctggtacaggaggccggc
agcctaaaggacttccttctgcaatcaactaagtttgtcatggtgggaaagctcctggga
ctgcgccctcacaaagttatattggaagaagcatccggaaaagccaaactcaacccaacc
gctaaagaattccagccttcatctaataatccttttgattcaataataagcgagactttg
gaaataagtcctgaatacaatccacttgagccatccaatccctttgttttactgcccaat
caaagcccagtttttaatggcaattgtatagtcccttgtcttccgctgtatggactgaat
cctttgcctgtagtttctgtagggcacccatttatacctggtctcggcattggaatgcag
cctacgataacagttaatagtgctgttatgtgtaatttaggcgtgccgcttcctaataga
gcaaaggagccagagcagtcaagtccaataatgcataacactttgactgggaatttgaat
cccaaaaatgacactgcatcagagaccaccatgacccagactgttcctttaagaagaaat
attcacaccggggtagtgtcagtacaggtagacagagacttatctgagcaagaagtaaat
actgagccttattatccttttgaagtgcagcagggagatatcctacggatagagaaagag
catctcgttctacaggagcagctaaaagaagcaacagagaagtatgagaatctgcagggc
cgctacaaggaggaaatcgctgggttgcataagcaaattagggaaacggctgacaataat
aagattataaagaaagaacttgaaatgtttaaccacgagatggataacgacaccaaaaaa
tggcaactagagaaaaaagagtatcatgataagctgagagtggtaaagagcggcattaag
gcggcaaatgaaactgtcgataagtattcaagggagattgaagaaaagaaacaacagtat
gaagcatacatagagacattcgtacagtctggttttaatattgaaaatgaaaaggcaaag
ttggaaaagcatattaaaagcaacgaggataagctccaggaaagcaagaagagagctatg
actgctgaggtccacttccttgagaacaaaaaacagactgatttattaaagctgaggatt
atggctgcaaaggtggaacacagcgccaacaagttaaaagccaatggctctgccacacct
tttgcacaaaaaagcatagcggatttatccccctcttatctaaaatctgaaagtgagaaa
ataaagtcccagtttgatgagaagattaaattagtggaaagtggatataagttggcaaat
atacaagcaaacaatctggcagctccattcaatgcatctgcttttcaaacacctctgctg
cccccttctcccacccccaagctccctacaaccaaacccagcaccccgctgccagcttcc
agttctgcacctccagcttccctcaagtccccattaaagccgactcgcgaaaccaagaaa
agcaaatctaaagatattaataaggatccgaaaccaccacctcctgcaattaatccaaag
gccacggcattagcagggaagggcccgggagcacccgtcatggagaagaaaggaaagccc
aacttagaggcacaacatcagtctcccggaaagccgactgcgtttgataagattattgag
gagctgcatgagatttttcctgactacaaaagtgcggagcttaccaacttcatcaaggag
ctgcgcaataagactggcggaacactggctggcatgaagcacgatgacattgttagcagg
gtgactgagtatatactggactcccaggataaggcccccccacaggcaccttgggtacaa
gcaagtggcaatgtatatccttcagcagtgaaaccccaggccccatcgccccagcccaaa
cagccctggagagtggtcactggtccctccaagaacaagtggcagaagtctgatgataca
gagtgctataatgatgagccgtgcattatctgccatgatgagctgcaacagtatccggtg
cagaagctggactgtgggcactgcttccatagacactgcataaagacctggctgaacaca
cagagcacctgcccgacctgcagagatcacgctctccttcctgaggacttcccggccctt
tctgggcgcataagaaccacctag
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integrated database retrieval system
