Xenopus tropicalis (tropical clawed frog): 100493254
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Entry
100493254 CDS
T01011
Symbol
ptprf
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X8
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04514
Cell adhesion molecules
xtr04520
Adherens junction
xtr04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100493254 (ptprf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
100493254 (ptprf)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
100493254 (ptprf)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100493254 (ptprf)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
100493254 (ptprf)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
100493254 (ptprf)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
100493254 (ptprf)
Cell adhesion molecules [BR:
xtr04515
]
Immunoglobulin superfamily
Type II RPTP family
100493254 (ptprf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
PTP-SAK
Tc-R-P
V-set
DSPc
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Ig_5
Ig_VEGFR-1-like_5th
Fn3_PTPRU
Insulin_TMD
ICAM_N
DUF3377
Motif
Other DBs
NCBI-GeneID:
100493254
NCBI-ProteinID:
XP_004914018
Xenbase:
XB-GENE-495325
UniProt:
A0A8J0QYV0
LinkDB
All DBs
Position
4:89075218..89640737
Genome browser
AA seq
1899 aa
AA seq
DB search
MVPCSCLSLLILSAIVLCCSITLTQADNEPVFVRKPDDQIGISGGVASFVCQATADPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINSSAKLT
VLEEEQLPHGFPVIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVDTASSNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHEV
MPGGSVNLTCVAVGAPMPYVKWMAGLEELTKEDEMPVGRNVLELTNIKESANYTCVAISS
LGMIEAVAQITVKALPKPPLDGTVTETTATSVTLTWDSGNPDPVSYYVIQYKPKASESSF
QEVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRGPPSEVIEAQTGEQAPSSPPLKVQAR
MLSASTMLVQWDLPEEPNGQIRGFRVYYTTDPHLPFSMWQKHNVVDNHLTTIGGLTTGTT
YSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPVDFQAEAETDTRILLTWLLPPQERITKY
ELLYWEGTDGEQQKLMFHPTSSYAVEGLKPDTLYHFRLAAWSDTGVGVYTPAIQARTAQS
TPSAPPQDVECSSLSSTAIRVSWVAPPASSRNGALTRYSLAYQALAGEDTSRHVVDSISP
DISSWEIKDLEKWTEYKVWVRAHTDVGAGPESSPIIVRTDEDVPSAPPRKVEVDSVNSTS
VRVTWKSPLPTKQNGQIRGYQVTYVRLEGGEPRGNPIIKDVMLSEAQWRPEDVGDYDAVI
TGLSPETTYSITVAAYTTKGDGARSKPKVVSTTGAVPGKPTMMISTTALNTALIQWHPPR
EIVGELLGYRLQYKRVDEDRFITIDFSKNEHHHTVTGLHKGASYIFKLSAKNRAGAGEEY
EKEISTAEDFPSGFPQNLQVVGLTTSTTEVSWEPPVLSERNGKITNYTVVYRDINSQQDL
TNVTRDTHITLVNLKPDTTYDIKVRARTNKGAGPLSPSIQSRTMPVDQVFAKNFRVNAVT
KTSVLLSWELPDSYKSAVPFKIFYNNQHVEVDGHSMRKLISNLKPDTEYSFVLMNRGSSA
GGLQHRVSIRTAPDVLKSKPFAANKYMEEGRFTLLLPQVQTTSPVRWYYIVVVPLDSSSG
GLNSRWQSPEEMELEQILEAINQGSRRHRRQASKNKPYIAARVNTLPESFILGDNKEYNG
FINKPLNQNLRYTCFVLAALEDGDTKKYAASPYSDDIVVEVISQAKQQEEPEMLWVMGPV
LAVILIIIIVIAILLFKRKRTNSPSGKDEQSVGLKDCLLAHSSDPVEMRRLNYQTPGMRD
HPPIPISDLADNIERLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSVDGVPGSDYINANYIDGYRKQNAYIATQGPLPETITDFWRMVWEQRTATIVM
MTRLEEKSRVKCDQYWPGRGSETYGMIQVTLMDTVELATYTVRTFTLYKNGSSEKRDVRQ
FQFMAWPDHGVPEYPTPILGFLRRVKGCNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERV
KLEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAVMCGITEVPARSLYAHIQKLS
QVPPGESVTSMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELSRVSLQPIRG
VEGSDYINASFIDGYRQQKGYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggtgccttgctcatgcttgtccctgttgatattgtcggcaatagtgctttgctgctca
atcacgttgacacaagcagacaatgagccagtctttgtcaggaagcccgatgaccagatt
ggaatatcaggtggtgttgcgtcttttgtgtgccaagcgacagcagaccccaagccacgg
attacctggatgaagaaggggaagaaagtcagttcccagcgctttgaggtaatagagttt
gacgatggatcgggatctgtccttcgaattcaacctctccgtgtacacagagacgaagca
atatacgagtgcactgcaaccaacagcgttggtgagatcaacagcagtgctaagctaaca
gtactagaagaggagcagcttccccatggatttcctgtcattgacatggggcctcaacta
aaagtcgtggaaaaaactcgcacagcaaccatgctttgtgcagccagtggcaatcctgat
ccagaaataacctggttcaaggattttcttcctgtagacacggcatcaagtaatggtcga
attaagcagctccgttcaggtgccttgcagatagaaaacagcgaggaatctgatcagggc
aaatatgaatgtgttgcaaccaacagtgcagggacacgttactcagctcctgctaacctc
tatgttcgtgtccgtcgagtggcaccaagattttctatccctcccagtaaccatgaagtg
atgcctgggggcagtgttaatttaacatgtgtagcagtgggggcccctatgccctatgtc
aaatggatggctggccttgaggaactcaccaaagaagatgaaatgcctgtgggccgcaat
gttttagaactgaccaatatcaaagagtctgccaattacacctgtgttgcgatctcctca
ttaggcatgattgaagcagttgcacagatcactgtgaaagcattgccaaaaccgcctttg
gatggtacagtaacagagactacagccactagtgtcaccctaacttgggattctggcaac
ccagacccagtctcttattatgtgattcagtataaacccaaagcttcagaaagctcattt
caagaagttgatggagtggcaacaactcggtacagtattgggggactgagccccttctca
gagtatgaatttcgcatcattgccgtaaacaatattggccgaggacctccaagtgaagtg
atagaggctcagacaggggaacaggcaccctcaagcccacctttgaaggtccaagctcgt
atgttaagtgccagtactatgctagttcagtgggacctaccagaagaaccaaatggccag
ataagaggtttccgggtttattacactactgatccacacttgccttttagtatgtggcaa
aaacacaatgttgttgacaaccacttgacaacaataggaggtctgaccacaggaaccact
tacagcattcgtgttcttgccttcacatctgtcggggatggaccgccttctgacataatt
caggtcaaaacacagcagggagttcctgcgcagcctgttgatttccaggcagaagctgag
actgacacacgcatattgctcacgtggcttctcccaccacaagaacgcattaccaaatat
gagctgctttactgggaaggaacagatggagaacagcaaaagcttatgtttcaccctacc
tcctcttatgctgtggagggtctgaaaccggacacactttatcatttccgattagctgcg
tggtctgacactggagttggtgtttacaccccagcaattcaagctagaactgcacaatct
acaccctcagccccgccacaggatgtggagtgctcgagtcttagctccactgccatccgg
gtaagttgggtggcccctccagcttccagccgcaacggggccctgacccgctactcactt
gcctaccaagccctggctggggaggacacatcccggcatgttgtggacagcatctcacca
gatatctccagctgggagatcaaggatctggagaaatggactgagtacaaagtatgggtg
cgagctcatacagatgtaggggctgggcctgaaagctcccccatcattgtgcggacagat
gaggatgtgccgagtgcaccaccaagaaaggttgaagtagactctgtaaactccacatct
gttcgtgtgacatggaagtctcctctaccaaccaagcaaaatgggcaaattagggggtat
caagtcacttatgttcgtctagaaggtggagagcctcgggggaatcccatcataaaagat
gttatgctgtcagaggctcaatggagacctgaggatgtgggagattacgatgctgttatc
actggcctctctcctgagaccacttattccatcactgtggccgcctacactactaaggga
gatggtgctagaagcaaacccaaggtcgttagcaccacaggagctgtgcctggtaaaccc
actatgatgatcagcaccacagcactgaacactgctctgatccagtggcatcctccaaga
gagattgtgggagagttgttaggatatcgtttgcagtacaagcgagtggatgaagacagg
tttattacaattgattttagcaagaatgaacatcaccacacagtgactgggctacataaa
ggtgcaagctatatattcaagctttctgcaaaaaaccgagctggagcaggggaggaatat
gaaaaggaaatttccacagctgaagattttcctagtgggtttccccaaaatctgcaagta
gttggacttacaacctctactacagaagtgtcctgggaaccaccagtgttgtctgagcgc
aatggaaagatcaccaactacacagtggtgtatcgggacataaatagccagcaggatctc
accaatgtcactcgcgacacacacataacattggtcaatctcaagccagacaccacatat
gacatcaaggtcagggcaagaacaaacaaaggcgctggccctctaagtcctagcattcaa
tcacgtacaatgcctgttgaccaagtgtttgctaagaatttcagagtaaacgccgtgaca
aaaacctcagtcttgctaagctgggagctgcctgattcttacaaatcagctgtgcctttc
aagatcttttacaataatcaacatgtagaagttgatggacactctatgcgcaaactgatc
agtaatctcaagccagatacagaatactcctttgtgctgatgaacagggggagcagtgca
ggtggactgcagcaccgcgtgtccattcgcacagcaccagatgttttaaaaagcaagcct
tttgctgccaacaaatacatggaggagggcaggttcaccttgctgttgcctcaggttcag
actacttccccagtaaggtggtattatattgtggttgtcccactggacagttccagcggg
ggtctgaattctcgctggcagagccctgaggaaatggagctagagcagatacttgaagca
ataaaccagggatcccgtcgtcatagaagacaggcaagcaagaataagccatacattgca
gcccgagtaaacacacttccagaatcctttattttgggtgacaataaagaatataatggg
ttcatcaacaagccactgaatcagaatttacgctacacctgctttgtgctagctgcacta
gaagatggggacactaaaaagtatgcagccagcccatactcagatgatattgtggtggag
gtgatctcacaggcaaaacaacaggaagagccagaaatgctttgggtcatgggtcctgtt
ctggctgtaattcttataataattatagttattgccattctacttttcaaaaggaaaagg
accaactctccttcaggcaaagatgaacagtcagtaggacttaaagactgtctcctcgct
cactcctcagatccagttgaaatgaggcgtctaaactaccaaactccaggtatgagagac
caccctcctattccaatctctgacctggcagacaacattgaaagactgaaggctaatgat
ggactcaagttctctcaggaatatgagtctattgatccaggtcagcaattcacgtgggaa
aattcaaatctagaagtaaacaaaccaaagaatcgctatgcaaatgtcattgcatatgac
cattcaagggtcattcttacctcagtggatggagttcccggaagtgattacattaatgcc
aattacatagatgggtacaggaaacagaatgcctatatagctacgcagggcccactgcca
gagactatcactgatttctggagaatggtgtgggagcaaagaaccgccactattgtcatg
atgacccggctagaggaaaaatcaagggtgaaatgtgaccagtactggcccggtcgtggc
tcagagacctatggtatgatccaagtcacattaatggacacagtagagcttgccacctac
acagttaggactttcacactttataagaatggctccagtgagaagcgggatgtcagacag
ttccaatttatggcctggcctgatcacggggtccctgaatatcctactcctattcttgga
ttccttcgcagagtgaaaggctgtaatccacctgatgctggtcctatggttgttcattgc
agtgctggcgtgggcagaacaggatgctttattgttattgatgccatgctagaacgggtg
aaactggagaaaactgtggatatttatggtcatgtgacctgcatgcgctcccaacgaaat
tatatggtgcaaacagaggaccagtacatctttatccatgaggctttgcttgaagcagta
atgtgcgggatcactgaagtgccagcacgcagtctgtatgcacatatccagaaactgtct
caggtccctccgggtgagagtgttacctccatggaactagagttcaagcttttggccaac
tctaaagcccacacctcacgatttatcagtgccaacctcccatgcaacaagttcaaaaac
agactggtaaacatcatgccatatgaactgagtcgtgtctccctgcagcccattcgtggt
gttgagggatcagattatatcaatgcaagtttcattgatggctacaggcagcagaaaggc
tacattgctactcagggtccattggccgagaccactgaggatttctggagaatgctgtgg
gaacataactccaccattgtggtgatgctgacaaagttgcgagaaatggggagggagaag
tgccatcagtactggcctgcagagcgctcagcacggtaccagtattttgtggtggaccct
atggctgagtataacatgcctcagtatatcctgcgtgagttcaaagtgacagatgcacgg
gatggccaatctcgtacaattagacaattccagttcactgattggcctgaacaaggagtg
ccaaaaacaggtgaaggctttattgacttcattgggcaggtgcacaaaaccaaggagcag
tttgggcaggatgggccaatcaccgttcactgcagcgctggcgtgggccgcactggagta
ttcatcactctcagtattgtactggagcgtatgaggtacgagggtgtggttgacatgttt
caaacagtgaagactttaagaacacagcggccagcaatggtacaaacagaggaccagtat
caactgtgctatagagccgcactggagtatctgggcagctttgaccactatgcaacataa
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integrated database retrieval system
