Xenopus tropicalis (tropical clawed frog): 100493402
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Entry
100493402 CDS
T01011
Symbol
dsel
Name
(RefSeq) dermatan-sulfate epimerase-like protein
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
xtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100493402 (dsel)
Enzymes [BR:
xtr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
100493402 (dsel)
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Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_3
DUF4962
Sulfotransfer_1
DUF6400
Motif
Other DBs
NCBI-GeneID:
100493402
NCBI-ProteinID:
XP_002939660
Xenbase:
XB-GENE-993490
UniProt:
A0A803JE89
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Position
6:101815093..101827338
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AA seq
1205 aa
AA seq
DB search
MALNYTEHYIFLFITILFFFFIDKSASNSSDWLLLTNNVAQYHKLYEFTSSAKQKSGLHP
NLYFDATNVQELRQKSHTSHIHLYRTIRNAVMKMLSNPSYYLPPPKHADFTAKWNEIYGN
NLPPLALYCLLSPDDKTAFTFVLEYMDRMANYKDWLVQTAPGDEVPLGHSLTGFATAYDF
LYSSLDNDRRQRYIKKIQMASEEMYEYSKIRSWGKQFLHNHQATNMLALLTGALVVQVYR
EAQANVWKQTVVDVMEKTMFLLNHVVDGSLDEGVAYGSYTSKSITQYVFLAHRHFGINHF
ENTWLKMHFYFYYSTLLPGFQRTIGIGDSNYNWFYGPESQLVFLDTFILKNGIGNWLAYQ
IRKHRPKDGPMVPSTAQRWSTLHTEYLWYNADLSLHPPPDHGTAKMHLFPNWGVVTYGAG
LPNTQTNTFFSFKSGKLGGRAVYDIVHFQPYSWVDGWRSFNPGHEHPDQNSFTFAPNGQV
FVSEALYGPKMSYLNNILVFAPSPTSQCNKPWEGQLGECSQWLKWTTEESGDVSGEIITA
NQHEEMVFVSGEAVSAYSSSMRLKSVYRGLLLLNHQTLLVIDHIEKYQDSPISLASAFFH
NLDIDFKYVAFKFLNKYNGAMMDIWDAHYKMFWLDQNGNSPSARIQEAEQAAEFKKRWTQ
FVNVTFQLNDKISRIAYLFFGPYVNVSDLKFLDDSKFGVKISVKINNTENIVSLVTEYND
LEARFSFLGFGGFAKVENQEKIVRFGLGVDHIRKHEPVGLNIFHFGLKVNVMIGLILCIG
LVILAFNWRFYISFSKLMRWILVLIITLYFFELLDVWSTCTQPICAKWNSEIADSENKYE
RQSINLPAIIITSLPSSGAEILKQLFFNSSDFIYIRVPTAYIDIPDGEFKVDSFVDACEW
SSSDVQEGHFKLIQGWLQSLLQNTKIHLQNIDLHEPSKPKLFHHSIITKDKKRRFKRRDP
FPEQKNRIKGSYDRDAEYIRHLRKQLIKFPNAQPVLGLSSGSWTLKLPFIQNIIGPSLRA
IFVVRDPRSWIYTLLYKSRPNLFSLRNIPQRLYEIFKEEEKQKCKSNAGYAFEYESLEDE
FFDSESNPLSKLSHLWLSNTAAARRINRNLPAINYLLVKFEDIINSPQETAEQIYTFFGI
PISPASLNQILFASSTNLFYLPQEGEISPSSLNTWKLNMPKEDIKLIENICLTQMQQLGY
TKYID
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggctctaaattatacagaacactatatttttctgtttattactattttgttcttcttt
ttcattgataaatctgctagcaattcatccgattggttgttgctgactaataatgttgct
cagtatcacaaattatatgaatttacatctagtgccaaacagaagagtggtttacatcca
aatttgtactttgatgctacaaatgttcaagaattaaggcagaaatcacatactagtcac
atacatttatataggacaattagaaatgctgtaatgaagatgctctctaatccatcatac
tatttgcctccaccaaagcatgctgattttacagcaaaatggaatgaaatttatggaaac
aaccttcctcctctggcactgtattgcctgctttctccagatgataaaaccgcatttact
tttgtacttgagtatatggacaggatggctaattacaaagactggttagtccaaactgct
cctggtgatgaagtgcctcttgggcattcattaactggctttgccacagcctatgacttt
ctgtatagttcactcgataatgatagaaggcaacgatatattaaaaagatccaaatggcc
agtgaagaaatgtatgaatattctaaaattcgctcatggggaaaacagtttcttcacaac
caccaagctactaatatgctagcactgcttacaggagcattggttgtacaggtttataga
gaagcccaggctaatgtttggaaacaaactgtggttgatgtaatggaaaagaccatgttt
cttctaaatcatgttgttgatggctctttggatgaaggagttgcttatggaagttatact
tctaaatctattactcagtatgttttcttagcacatcgacattttggtatcaatcacttt
gagaacacctggttgaaaatgcacttctacttttattattctaccctgctgccaggtttt
cagagaacaattggaataggagactcaaactataactggttttatggtcctgaaagccag
ttggtgtttctggacacatttattttaaagaatgggatagggaattggctagcctatcag
atccgaaaacacagacctaaagatggacctatggtaccatctacagcacagaggtggagc
acccttcatacagaatatctatggtacaatgcagatctttctttgcatcctcctcctgat
catggcactgcaaaaatgcacttgtttccaaactggggagttgtgacttatggagctgga
ttaccaaatactcagactaatacatttttctctttcaaatctggaaagcttggtggtcgg
gcagtttatgatattgttcattttcaaccatactcttgggtagatggatggagaagtttc
aatccagggcatgagcatcctgatcaaaactcctttacatttgctcccaatggacaagtc
tttgtctctgaagcactatatggaccaaaaatgagttatttaaataatatactagttttt
gctccatcacctacgagtcagtgtaataaaccttgggaaggacagttgggagaatgctca
cagtggcttaaatggacaaccgaagaatctggtgatgtatctggtgagattataacagcc
aatcagcatgaagaaatggtatttgtaagtggtgaagcagtctctgcttattcgtcttcc
atgagattaaagagtgtttaccgtggtttactgcttttaaaccatcagactcttttggta
attgatcatatagagaagtatcaagattctccaatatctctagctagtgccttcttccac
aatctggatattgattttaaatatgttgcttttaaatttttaaacaaatacaatggcgct
atgatggatatttgggatgctcactacaaaatgttttggttagaccaaaatggtaatagc
ccctctgcaaggatacaagaagcagaacaggcagctgaatttaagaagcgttggacgcaa
tttgtaaatgtaacctttcaattgaatgacaaaatttcaagaatcgcatacttattcttt
gggccatatgttaatgtatcagatctaaagtttctagatgatagtaaattcggggttaag
atttctgtaaagattaacaatactgaaaatattgtatctttagttactgaatataatgat
ttagaggcccgatttagctttcttggatttggcgggtttgcaaaagtagagaatcaagaa
aaaatagtacggtttggcttaggggttgatcatattagaaaacatgaacctgttggttta
aatatatttcattttggcttgaaagtaaatgtaatgattggattgatattgtgcataggt
ctggtcattttagcatttaactggagattctatatttcctttagtaagctgatgcgctgg
atcctagtattgattattacactttatttttttgaattactagatgtatggagtacatgt
acccaacccatttgtgctaagtggaacagtgaaatagcagacagtgaaaataaatatgaa
aggcaatctataaatctcccagctataattatcacctctcttcccagttcaggagctgag
attttaaagcaactttttttcaacagctctgatttcatatatattagagtccctaccgct
tatattgatattccagatggagagtttaaggttgattcgtttgtcgatgcatgtgaatgg
agtagttctgatgttcaggaaggacattttaaattaatccaaggttggctgcagtcacta
cttcagaatacaaaaattcatttacaaaacattgatttgcatgagcctagcaaaccaaaa
ctttttcatcacagtatcatcactaaggataaaaaaagaagatttaaaagaagggaccca
tttccagaacaaaaaaatagaatcaaaggtagctatgacagagatgcagagtacattaga
caccttaggaaacaattaataaagtttccaaatgctcagcctgtacttggtttaagcagt
ggaagctggacattaaaattaccttttattcaaaatattattggaccttcgttgagagca
atatttgttgttcgagaccctcgttcatggatttatacattgctatataaaagcaggcct
aatctattctctttgaggaatatccctcagcgtttatatgaaatattcaaagaagaagaa
aaacagaaatgtaagtctaatgcaggctacgcatttgaatatgaatcattagaagatgaa
ttctttgattcagaatcaaatcctctttcaaaactgtcccacttgtggttatcaaacaca
gctgcagcacggaggataaacagaaacttgcctgcaataaattatctcttggttaaattt
gaagacattataaactcgccacaagaaacagcagaacagatctatacattttttggaatt
cctatttctcctgcaagtttaaaccaaatactttttgctagttccacaaacttattttat
cttccacaagaaggagagatatccccatcaagcttaaatacttggaaacttaatatgcct
aaggaagatattaaattaattgagaatatatgtttaacacaaatgcaacagcttggatat
acaaagtatatagattaa
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