Xenopus tropicalis (tropical clawed frog): 100493720
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Entry
100493720 CDS
T01011
Symbol
trpc5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xtr01009
]
100493720 (trpc5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
100493720 (trpc5)
Protein phosphatases and associated proteins [BR:
xtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100493720 (trpc5)
Ion channels [BR:
xtr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100493720 (trpc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
YVC1_C
FlaX
KH_11
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
100493720
NCBI-ProteinID:
XP_017952480
Xenbase:
XB-GENE-1013348
UniProt:
A0A803KC62
LinkDB
All DBs
Position
8:complement(51863947..51976327)
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AA seq
982 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAEAELSQEEKAYLIAVEKGDYASVKHALEEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHNIYVGDALLYAIRKEVVGAVELLLSHRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKKFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLVTCITIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTASYLTFLFLLLLASQHIVRTELHMQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSKPREEWDMWHPTLIAEA
FFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATMPPP
FNIIASPKSIWYFCKWVRYKLCPGKNSEEDIQKQHENLKTFTERHADNLIQNQHYQEVIR
NLVKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRSYSTSSTEV
SQKDEATEERPKAKSVSFGISNKKKDFNVSALIKTMSGIEIVEDAPKSNGINKRSFIRNG
NKIQRLSSSKKESFKRLGLLFSKMNGHVTEPASEPVYTISDGVVQPHAMWQDLQHPQTGQ
EAERSVSETNLNEVSHDGSIVGQSNENPPICTNSLHCASNLCSSNTRLIDSTEDVFDSWG
EACDLFINKWKDGQEEQVTTRL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtattacaaaaaggtgaactactcaccctacagagaccggatcccctta
cagattgtaagggcggaggcagagctgtcacaggaggaaaaggcctacctcattgctgtg
gagaagggggattatgccagtgtcaaacatgccttggaggaggccgaaatctattacaat
atcaacatcaattgcatggatccactgggccgcagcgctcttcttatagccatagagaac
gagaacctggagataatggagctgctgctaagccacaatatatatgtgggggatgctctc
ttgtatgcaataaggaaggaagtagtgggagctgtagaacttcttctcagtcacaggaaa
ccaagtggagagaagcaggtgccaacgttaatgatggacacacagttttccgagtttacc
ccggacatcactcctatcatgttggcagctcacactaataactatgaaataataaagctc
ctagtccaaagaagagtaaccatccctcgaccacaccagatacgttgcaactgtgtggag
tgtgtttccagctcagaagttgacagccttaggcactccaggtcaaggcttaacatttac
aaggctcttgctagcccgtctctgattgccttatctagtgaggatcccatcctgactgct
tttcgccttggctgggaactaaaagagctcagcaaagtggagaatgaatttaaggcagaa
tatgaagaactgtctcagcagtgtaagaagtttgccaaggacttgcttgatcaagctcga
agttctagagaactggagattatcctcaaccacagggatgaccaaagtgaggagctggac
cctcagaagtgtcatgaccttgcaaaactgaaagtagcaataaagtatcaccagaaggag
tttgtcgcccagccaaactgccagcagttattggctacactgtggtacgatggattcccg
ggttggcggcggaagcactgggctgtaaagttggtgacttgcattaccattgggctgttg
ttccctgtgctatccgtggcatatttgattgcaccgaagagcaggctgggactgttcatt
aaaaagccattcatcaagtttatctgccacacagcctcatatctcaccttcctcttcctc
ttgctcctggcctcccagcacatagtgagaactgaactgcacatgcaaggacctcctccc
acagtagttgagtggatgatcttgccctgggtcctaggttttatttggggtgaaataaag
gagatgtgggatggggggtttaatgagtacgtgcatgactggtggaacctcatggacttt
gcaatgaactccctctaccttgcaaccatctcccttaaaatagttgcttatgtgaagtac
aatggctcaaagccaagagaagagtgggacatgtggcaccccacactgattgctgaagct
ttttttgcaatatccaatatcctgagctccctacgtctcatctccctgttcacagcgaat
tcccaccttggccccttacaaatttcccttgggaggatgctgctggacattctcaaattc
ctctttatctactgcctggtgctgctggcctttgccaatggactaaaccaactctacttt
tattatgagactagtgcctctgaggaacctaacaactgcaaggggattcgatgcgagaaa
cagaacaatgcattctccaccctttttgagacccttcagtctttgttttggtcagtattt
ggtcttctgaacctgtatgtcaccaatgttaaagcacgccacgagtttaccgagtttgtt
ggagctacaatgtttggaacgtacaatgtcatctcattggttgtgttactcaacatgctg
atagccatgatgaacaattcctaccagctcattgcggatcatgctgatattgaatggaaa
tttgctaggactaagctatggatgagttattttgatgaaggtgcgacaatgcctcctcct
tttaacatcattgccagcccaaagtccatctggtacttctgcaagtgggtccgctataaa
ctctgcccaggcaagaactccgaagaagacattcaaaagcagcacgaaaacctaaagacg
tttacagaacggcatgccgacaacctgattcagaatcagcattaccaggaagttatcaga
aatctggtaaaaagatatgttgctgcgatgatcagaaattcaaagaccaatgaagggctg
acagaagaaaacttcaaggaactgaaacaggacatctccagctttagatatgaagtgctc
gatctcttaggaaatcgaaagccaccgcgacgaagctactccaccagcagcaccgaggtg
tctcaaaaagatgaggcgacagaagagcgccccaaggcaaaaagtgtttcttttggcata
agcaacaaaaaaaaggatttcaatgtatcagcactgattaagacaatgtctgggattgaa
atcgtggaggatgcacccaagagtaacggcattaataagcgctcctttatccggaatggt
aacaagattcagaggctttcaagttctaagaaggagtcctttaaaaggctgggtctactc
ttttccaaaatgaatgggcatgtgaccgagccagcatctgaaccagtatacaccatttca
gatggcgtggtccagcctcacgctatgtggcaggacttacaacatccccagactggccaa
gaggcagagcgctctgtaagtgaaactaacctcaatgaggtaagtcatgatgggagcatt
gttggacaaagcaatgagaatcctcctatttgcaccaactctttacactgtgcttccaac
ctctgctcttctaacaccaggcttatagactcaacagaagatgtttttgactcttggggt
gaggcatgtgacctatttatcaataagtggaaagatggtcaggaagagcaggtcacaaca
agactataa
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